OR7E12P Olfactory Receptor
| Gene Symbol | OR7E12P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-3, AC000378-A, hg1058, HsOR11.2.1P, ORL3650 |
| External Ids | HGNC: 8383 GeneBank: AF065854, AF399383, NG_002179 ORDB: ORL3650 |
| Build #39 labels | OR7E12P |
| Chromosomal location | 11:3,390,810-3,391,749 (-) |
| Cluster | 11@3 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E11P | 91.8% | 317 |
| OR7E59P | 90.62% | 320 |
| OR7E84P | 89.06% | 320 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 73% | 305 |
| Mouse | Or7e178 | 66% | 311 |
| Rat | Or7e173 | 67% | 306 |
| Cow | OR7E186 | 70% | 308 |
| Orang | OR7E53P | 87% | 312 |
| Orang | OR7E14P | 86% | 314 |
| Orang | OR7E84BP | 86% | 315 |
| Horse | OR7E225 | 71% | 306 |
| Chimp | OR7E36P | 88% | 314 |
| Chimp | OR7E59P | 87% | 317 |
| Chimp | OR7E38P | 87% | 314 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | EC516607 |
| GNF Atlas2 | 216698_x_at |
Sequence information
| Nucleotide sequence |
AATGATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCAAACTCTCA GAGGATCCAGAACTGCAGCAGGTCGTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACG GTGCTGGGGAACCTACTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCACACCCCC ATGTACTTGTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCACGGTC CCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTG ACTCAGATGTCTCTCTTTGCCATTTTTGGAGGTATGGAAGAGAGACATGCTCCTGAGTGT GATGGCCTATGACCGGTTTGTAGCCATCTGTCACCCTCTATATTGTTCAGCCATCTTTAA CCCGTGTTTCTGTGGCTTCCTAGATTTGTTGTCTTTTTTTTTTTTTTTCTCAGTCTTTCA GACTCCCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAAGGATGTGGAAATT CCTAATTTCTTCTGGGAACCTTCTCAACTCTCCCATCTTGCATGTTGTGACACCTTCACC AGGAACATCAGTATTTCCCTGCTGCCATATTTGGTTTTCTTCCCATCTTGGGGACCCTTT TCTCTTACTGTAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAGTATA AACCTTCTCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTATGGAACAGGCAT TGGAGGGTACCTCGGTTCAGATGTGTCATCTTCCCCGAGAAAGGGTGCAGTGGCCTCAGT GATGTACATGGTGGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGAAACAGGGA TATGAAAAGTGTCCTGCGGCGGCCGCATGGCAGCACAGTC |
| Conceptual translation |
NDTDPQSLTDVSIFLLLKLSEDPELQQVVAGLFLSMCLVTVLGNLLIILAVSPDSHLHTP MYLFLSNLSLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLFAIFGGMEE\MLLS VMAYDRFVAICHPLYCSAIFNPCFCGFL\CCLFFFF\SLSDSQLHNLIALQMTCFKDV EIPNFFWEPSQLSHLACCDTFTRNI/YFPAAIFGFLPILGTLFSYCKIVSSILRVSSSG GKYK/FSTCGSHLSVVCXYGTGIGGYLGSDVSSSPRKGAVASVMYMVVTPMLNPFIYS LRNRDMKSVLRRPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 3,412,591 | 3,412,591 | SNP | A/T | rs3890867 (DbSNP) | |
| 11 | 3,412,641 | 3,412,641 | SNP | T/G | rs2005656 (DbSNP) | |
| 11 | 3,412,642 | 3,412,642 | SNP | T/G | rs2005655 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 155 (Hasin) | |||
| 11 | 3,236,512 | 3,801,429 | CopyNumber | Variation_3833 (DGV) |
| 11 | 3,405,664 | 3,472,159 | CopyNumber | Variation_85618 (DGV) |
| 11 | 3,405,664 | 3,622,881 | CopyNumber | Variation_85617 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.