OR7E140P Olfactory Receptor
| Gene Symbol | OR7E140P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR12.1.1P |
| External Ids | HGNC: 19561 GeneBank: NG_004309 |
| Build #39 labels | OR7E140P |
| Chromosomal location | 12:8,414,780-8,415,775 (-) |
| Cluster | 12@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E149P | 96.33% | 327 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 67% | 316 |
| Mouse | Or7e178 | 62% | 310 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 66% | 307 |
| Orang | OR7E103P | 91% | 307 |
| Orang | OR7E163P | 91% | 299 |
| Orang | OR7E103BP | 89% | 301 |
| Horse | OR7E225 | 66% | 318 |
| Chimp | OR7E161P | 89% | 320 |
| Chimp | OR7E163P | 88% | 320 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E115P | 86% | 320 |
Sequence information
| Nucleotide sequence |
CTTTCCTTCTCAAGGTGTCCAAGACACACAGAGCCACGGAATCTCACAGGTGTCTGAGAA TTCCTCCTCCTGGGACTCTCAGAGGATCCAGAACTGCAGCCCGTCCTCACTTTGCTGTCC CTGTCCCTGTCCACGTATCTGGTCACGGTGCTGAGGAACCTGCTCAGCATCCTGGCTGTC AGCTCTGACTCCCCCTTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTGCTGGGCT GACATCGGTTTCACCTCGGCCACGGTTCCCAAGATGATTGTGGACATGCAGTCGCATAGC AGAGTCATCTCTCACGCAGGCTGCCTGACACAGATGTATTTCTTGGTCCTTTTTGCATGT ATAGAAGGCATGCTCCTGACTGTGATGGCCTATGACGGCTTTGTAGCCATCTGTCGCCCT CTGCACTACCCAGTCATCGTGAATCCTCACCTCTGTGTCTTCTTCGTTTTGGTGTCCTTT TTCCTTAGCCTGTTGGATTCCCAGCTGCACAGTTGGATTGTGTTACAATTCACCATCATC AAGAATGTGGAATTCTCTCATTTTGTCTGTGACCCCTCTCAACTTCTCAAACTTGCCTGT TCTGACAGCGTCATCAATAGCATATTCATATATTTCGATAGTACTACGTTTGGTTTTCTT CCCATTTCAGGGATCTTTTTGTCTTACTATAAAATTGTCCCCTCCATTCTAAGGATTTCA TCGTCAGATGGGAAGTATAAAGGCTTCTCCATACGTGGCTCTCACTTGGCAGTTGTTTGC TGATTTGATGGAACAGGCATTGGCATGTACCTGGCTTCAGCTGTGTCACCACCCCCCAGG AATGGTGTGGTGGCGTCAGTGATGTACGCTGTGATCACCCCCATGCTGAACCTTTTCATC TGCAGCCTGAGAAACAGGGACATACAAAGTGCCCTGCGGAGGCTGCGCAGCAGAACAGTG GAATCTCATGATCTGTTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
LSFSRCPRHTEPRNLTGVXFLLLGLSEDPELQPVLTLLSLSLSTYLVTVLRNLLSILAV SSDSPFHTPMYFFLSNLCWADIGFTSATVPKMIVDMQSHSRVISHAGCLTQMYFLVLFAC IEGMLLTVMAYDGFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLHSWIVLQFTII KNVEFSHFVCDPSQLLKLACSDSVINSIFIYFDSTTFGFLPISGIFLSYYKIVPSILRIS SSDGKYKGFSIRGSHLAVVCXDGTGIGMYLASAVSPPPRNGVVASVMYAVITPMLNLFI CSLRNRDIQSALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 12 | 8,568,177 | 8,568,176 | Ins(1) | -/G | rs34545708 (DbSNP) | |
| 12 | 8,568,245 | 8,568,245 | SNP | A/G | rs9668276 (DbSNP) | |
| 12 | 8,568,238 | 8,568,238 | SNP | A/G | rs9668275 (DbSNP) | |
| 12 | 8,568,175 | 8,568,175 | SNP | A/T | rs35243314 (DbSNP) | |
| 12 | 8,568,270 | 8,568,270 | SNP | C/G | rs13377669 (DbSNP) | |
| 12 | 8,568,126 | 8,568,126 | SNP | C/G | rs34927362 (DbSNP) | |
| 12 | 8,568,342 | 8,568,342 | SNP | C/T | rs13378105 (DbSNP) | |
| 12 | 8,568,263 | 8,568,263 | SNP | C/T | rs13378099 (DbSNP) | |
| 12 | 8,568,189 | 8,568,189 | SNP | G/T | rs34603634 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 12 | 8,557,265 | 8,591,871 | CopyNumber | Variation_0425 (DGV), Variation_35122 (DGV) |
| 12 | 8,280,755 | 8,580,804 | CopyNumber | Variation_2969 (DGV) |
| 12 | 7,856,819 | 8,623,987 | CopyNumber | Variation_3873 (DGV) |
| 12 | 8,555,826 | 8,591,712 | CopyNumber | Variation_22915 (DGV) |
| 12 | 8,556,966 | 8,592,561 | CopyNumber | Variation_23225 (DGV) |
| 12 | 8,550,961 | 8,603,512 | CopyNumber | Variation_35121 (DGV) |
| 12 | 8,558,488 | 8,584,672 | CopyNumber | Variation_37828 (DGV) |
| 12 | 8,558,486 | 8,568,227 | CopyNumber | Variation_39097 (DGV) |
| 12 | 8,544,884 | 8,601,829 | CopyNumber | Variation_71454 (DGV) |
| 12 | 8,323,225 | 8,589,822 | CopyNumber | Variation_71457 (DGV) |
| 12 | 8,560,322 | 8,577,607 | CopyNumber | Variation_71460 (DGV) |
| 12 | 8,532,974 | 8,600,304 | CopyNumber | Variation_75930 (DGV) |
| 12 | 8,535,277 | 8,600,304 | CopyNumber | Variation_86181 (DGV) |
| 12 | 8,442,317 | 8,600,304 | CopyNumber | Variation_86182 (DGV) |
| 12 | 8,563,367 | 8,600,304 | CopyNumber | Variation_86183 (DGV) |
| 12 | 8,533,001 | 8,596,370 | CopyNumber | Variation_101423 (DGV) |
| 12 | 8,565,376 | 8,568,471 | Deletion | #4 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.