OR7E145P Olfactory Receptor
| Gene Symbol | OR7E145P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.14.1P |
| External Ids | HGNC: 19618 GeneBank: NG_004336 |
| Build #39 labels | OR7E145P |
| Chromosomal location | 11:67,722,459-67,723,484 (-) |
| Cluster | 11@67 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 91.52% | 342 |
| OR7E1P | 91.52% | 342 |
| OR7E87P | 89.71% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 65% | 331 |
| Mouse | Or7e177 | 61% | 316 |
| Rat | Or7e173 | 60% | 310 |
| Cow | OR7E186 | 66% | 307 |
| Orang | OR7E103P | 88% | 307 |
| Orang | OR7E163P | 88% | 299 |
| Horse | OR7E225 | 65% | 330 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E163BP | 88% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E115P | 86% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h05605_at |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTGTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GGGCCACGGAATCTCACAGGTGTCCGAGAATTCCTCCTCCTGGGACTCTCAGAGGACCCA GAACTGCAGCTTATCCTCACTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCATG TACTTCTTCCTCTCCAAGCTGTGCTGGGCTGACATCGGTTTCACCTCGGCCACGGTTCCC AAGATGATTGTGGACATGCAGTCACATAGCAGAGTCATCTCTCATGCGGGCTGCCTGACG CAGATATCTTTCTTGGTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGACTACTTTGTAGCCATCTGTCGTCCTCTGCACTACCCAGTCATTGTGAATCCTCAG CTCTGTGTCTTCTTCTTTTTGGTGTCCTTTTTCCTTAGCTTGTTGGATTCCCAGCTGCAC AGTTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTTTGTCTGT GACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATA TATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTCCAGGGATCCTTTTGTCTTACTAT AAAATCATCCCCTCCATTCTAAGGATTTCATCATCAGATGGGAAGTATAAAGCCTTCTTC ACCTGTGGCTCTCACCTAGCAGCTGTTTGCTGATTTTATGGAACAGGCATTGGTGTGTAC CTGACTTCAGCTGTGTCAGCACCCCCCAGGAATGGTGTGATGGTGTCAGTGATGTACGCT GTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGCGGAGGCTGCACAGCAGAGCAGTCAAATCTCATGATCTGTTCCATCCTTTTTCT TGTGTG |
| Conceptual translation |
LVFICYFSNPLSFSRCPRHTGPRNLTGVREFLLLGLSEDPELQLILTLLSLSLSMYLVTV LRNLLSILAVSSDSPLHTPMYFFLSKLCWADIGFTSATVPKMIVDMQSHSRVISHAGCLT QISFLVLFACIEGMLLTVMAYDYFVAICRPLHYPVIVNPQLCVFFFLVSFFLSLLDSQLH SWIVLQFTIIKNVEISNFVCDPSQLLKLACSDSVINSIFIYFDSTMFGFLPIPGILLSYY KIIPSILRISSSDGKYKAFFTCGSHLAAVCXYGTGIGVYLTSAVSAPPRNGVMVSVMYA VVTPMLNLFIYSLRNRDIQSALRRLHSRAVKSHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 67,490,887 | 67,490,886 | Ins(1) | -/G | rs34963342 (DbSNP) | |
| 11 | 67,490,122 | 67,490,122 | SNP | A/G | rs59102771 (DbSNP) | |
| 11 | 67,490,825 | 67,490,825 | SNP | A/G | rs4930220 (DbSNP) | |
| 11 | 67,490,199 | 67,490,199 | SNP | C/G | rs59561797 (DbSNP) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 67,472,905 | 67,891,289 | CopyNumber | Variation_2931 (DGV) |
| 11 | 67,234,322 | 67,626,901 | CopyNumber | Variation_5275 (DGV) |
| 11 | 67,448,219 | 67,765,961 | CopyNumber | Variation_85827 (DGV) |
| CopyNumber | 48 (Hasin) | |||
| 11 | 67,487,930 | 67,491,055 | Deletion | #301 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.