OR7E149P Olfactory Receptor
| Gene Symbol | OR7E149P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR12.1.3P |
| External Ids | HGNC: 19589 GeneBank: NG_004297 |
| Build #39 labels | OR7E149P |
| Chromosomal location | 12:8,437,403-8,438,383 (-) |
| Cluster | 12@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 91.74% | 327 |
| OR7E140P | 96.33% | 327 |
| OR7E99P | 92.35% | 327 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 67% | 315 |
| Mouse | Or7e178 | 63% | 310 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 67% | 307 |
| Orang | OR7E103P | 92% | 307 |
| Orang | OR7E163P | 91% | 299 |
| Orang | OR7E103BP | 90% | 301 |
| Horse | OR7E225 | 66% | 314 |
| Chimp | OR7E161P | 89% | 317 |
| Chimp | OR7E163P | 89% | 317 |
| Chimp | OR7E163MP | 88% | 317 |
| Chimp | OR7E115P | 86% | 317 |
Sequence information
| Nucleotide sequence |
ATGTGTCCAAGACACACAGAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTG GGACTCTCAGAGGATCCAGAACTGCAGCCCGTCCTCACTTTGCTGTCCCTGTCCTTGTCC ATGTATCTGGTCACGGTGCTGAGGAACCTGCTCAGCATCCTGGCTGTCAGATCTGACTCC CCCCACCACACCCCCATGTACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATGGGTTTC ACCTCAGCCACGGTTCCCAAGATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCT CACGCAGGCTGCCTGACACAGATGTATTTCTTGGTCCTTTTTGCATGTATAGAAGGCATG CTCCTGACTGTGATGGCCTATGACGGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCA GTCATCGTGAATCCTCACCTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTG TTGGATTCCCAGCTGCACAGTTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAA TTCTCTCATTTTGTCTGTGACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTC ATCAATAGCATATTCATATATTTCGATAGTACATTTGGTTTTCTTCCCATTTCAGGGATC TTGTTGTCTTACTATAAAGTCGTCCCCTCCATTCTAAGGATGTCATCGTCAGATGGGAAG TATAAAGCTTTCTCCACCTGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTGATGGAACA GGCATTGGCATGTACCTGGCTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCG TCAGTGATGTACGCTGTGATCACCCCCATGCTGAACCTTTTCATCTGCAGCCTGAGAAAC AGGGACATACAACGTGCCCTGCGGAGGCTGCGCAGCAGAACAGTGGAATCTCATGATCTG TTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
MCPRHTEPRNLTGVXFLLLGLSEDPELQPVLTLLSLSLSMYLVTVLRNLLSILAVRSDS PHHTPMYFFLSNLCWADMGFTSATVPKMIVDMQSHSRVISHAGCLTQMYFLVLFACIEGM LLTVMAYDGFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLHSWIVLQFTIIKNVE FSHFVCDPSQLLKLACSDSVINSIFIYFDSTFGFLPISGILLSYYKVVPSILRMSSSDGK YKAFSTCGSHLAVVCXDGTGIGMYLASAVSPPPRNGVVASVMYAVITPMLNLFICSLRN RDIQRALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 12 | 8,571,371 | 8,571,371 | large insertion | 22464bp insertion | rs72493726 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 12 | 8,557,265 | 8,591,871 | CopyNumber | Variation_0425 (DGV), Variation_35122 (DGV) |
| 12 | 7,856,819 | 8,623,987 | CopyNumber | Variation_3873 (DGV) |
| 12 | 8,555,826 | 8,591,712 | CopyNumber | Variation_22915 (DGV) |
| 12 | 8,556,966 | 8,592,561 | CopyNumber | Variation_23225 (DGV) |
| 12 | 8,550,961 | 8,603,512 | CopyNumber | Variation_35121 (DGV) |
| 12 | 8,575,904 | 8,596,862 | CopyNumber | Variation_61204 (DGV) |
| 12 | 8,544,884 | 8,601,829 | CopyNumber | Variation_71454 (DGV) |
| 12 | 8,532,974 | 8,600,304 | CopyNumber | Variation_75930 (DGV) |
| 12 | 8,535,277 | 8,600,304 | CopyNumber | Variation_86181 (DGV) |
| 12 | 8,442,317 | 8,600,304 | CopyNumber | Variation_86182 (DGV) |
| 12 | 8,563,367 | 8,600,304 | CopyNumber | Variation_86183 (DGV) |
| 12 | 8,533,001 | 8,596,370 | CopyNumber | Variation_101423 (DGV) |
| CopyNumber | 177 (Hasin) | |||
| 12 | 8,587,999 | 8,591,079 | Deletion | #3 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.