OR7E158P Olfactory Receptor
| Gene Symbol | OR7E158P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR8.4.1P |
| External Ids | HGNC: 31232 GeneBank: NG_004376 |
| Build #39 labels | |
| Chromosomal location | 8:11,919,896-11,920,795 (-) |
| Cluster | 8@12a |
| Synteny | CLIC#0 |
| Remarks | Disrupted by STR2 repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E36P | 87.42% | 302 |
| OR7E37P | 87.38% | 301 |
| OR7E43P | 85.67% | 300 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 299 |
| Mouse | Or7e177 | 63% | 296 |
| Rat | Or7e173 | 62% | 287 |
| Cow | OR7E193 | 66% | 300 |
| Orang | OR7E26P | 85% | 296 |
| Orang | OR7E15P | 85% | 296 |
| Orang | OR7E14P | 83% | 296 |
| Orang | OR7E12P | 83% | 287 |
| Horse | OR7E225 | 65% | 296 |
| Chimp | OR7E36P | 87% | 298 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG190064 |
Sequence information
| Nucleotide sequence |
TTTCAACCCTCTTTTCTAGGCAAAAGCTGTCCAAACTCTACAGACCCACAGAATCTAACA GATGTCTCTCTATTCCTCCTCCTAGAACCTCACAGGATCCAGAACTGCAGCCGGTCGTCA CTGGGCTGTTCCTGTCCATGTGCCTGGTCACTGTGCTGGGGAACCCGCTCATCCTCCTGT CTGTCAGCCCTGAGTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTCCT TGCCTGACATCGGTTTCACCTCCACCGCGGTCCCCAAGATGATTGTGGACATCCAATCTC ACAGCAGAGTCATCTCCTATGCAGGCCGTCTGACTCAGATGTCTCTCTTTGCCATTTTTG GAGGCATGGAAGAGAGACATGCTCCTGAGTGTGATGGCCTATGACCGGTTTGTAGCCATC TGTCACCCTCTATATCATTCAGCCACCATGAACCCGTGTTTCTGTGGCTTCCTACTTTTG TTGTCTTTTTTTTTTTTCTCGGTCTTTTAGAAGTGCAGCTGCACAACTTGATTGCCTTAC GAATGAACTGCTTCAAGGATGTGGAAATTCCTAATTTCTTCTGTGACCCTTCTCAACTCC CCCATATTGCATGTTGTGACACCTTCACCAATAACATAATCATGCATTTCCCTGCTGCCA TATTTGGTTTTCCTCCCATCTCGGGGACCCTTTTCTCTTACTCTAAAATTGTTTTCTCCA TTCTGAGGGTTTCATCATCAGGTGGGAAGTATAAGGCCTTCTCCACCTGTGGGTCTTACC TGTCAGTTGTTTGCTGATTTTATGGAACAGGCGTTGGAAGCTACCTCAGTTCAGATGTGT CATCTTCCCTGAGACAGGGTGCAGTGGCCTCAGTGATGTACACGGTGGTCACCCCCATGT |
| Conceptual translation |
FQPSFLGKSCPNSTDPQNLTDVSLFLLLE/SQDPELQPVVTGLFLSMCLVTVLGNPLIL LSVSPESHLHTPMYFFLSNLSLPDIGFTSTAVPKMIVDIQSHSRVISYAGRLTQMSLFAI FGGMEE\MLLSVMAYDRFVAICHPLYHSATMNPCFCGFLLLLSFFFF/GLLEVQLHNL IALRMNCFKDVEIPNFFCDPSQLPHIACCDTFTNNIIMHFPAAIFGFPPISGTLFSYSKI VFSILRVSSSGGKYKAFSTCGSYLSVVCXYGTGVGSYLSSDVSSSLRQGAVASVMYTVV TPM Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 11,777,819 | 11,777,819 | Del(1) | -/A | rs57678189 (DbSNP) | |
| 8 | 11,778,298 | 11,778,298 | Del(1) | -/G | rs35199547 (DbSNP) | |
| 8 | 11,777,696 | 11,777,696 | SNP | A/C | rs9771686 (DbSNP) | |
| 8 | 11,777,884 | 11,777,884 | SNP | A/C | rs7463895 (DbSNP) | |
| 8 | 11,777,481 | 11,777,481 | SNP | A/G | rs73663050 (DbSNP) | |
| 8 | 11,777,455 | 11,777,455 | SNP | A/G | rs9772986 (DbSNP) | |
| 8 | 11,777,921 | 11,777,921 | SNP | A/G | rs6986668 (DbSNP) | |
| 8 | 11,777,602 | 11,777,602 | SNP | A/G | rs6986166 (DbSNP) | |
| 8 | 11,777,977 | 11,777,977 | SNP | C/G | rs7461273 (DbSNP) | |
| 8 | 11,777,901 | 11,777,901 | SNP | C/T | rs7464553 (DbSNP) | |
| 8 | 11,777,406 | 11,777,406 | SNP | C/T | rs9774603 (DbSNP) | |
| 8 | 11,777,849 | 11,777,849 | SNP | C/T | rs6987692 (DbSNP) | |
| 8 | 11,778,192 | 11,778,192 | SNP | C/T | rs35776335 (DbSNP) | |
| 8 | 11,777,764 | 11,777,764 | SNP | C/T | rs9329250 (DbSNP) | |
| 8 | 11,919,897 | 11,919,897 | SNP | C/T | 1000GP (CEU) | |
| 8 | 11,919,946 | 11,919,946 | SNP | A/G | 1000GP (CEU) | |
| 8 | 11,919,972 | 11,919,972 | SNP | G/A | 1000GP (CEU) | |
| 8 | 11,920,295 | 11,920,295 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 8 | 11,920,468 | 11,920,468 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 8 | 11,920,683 | 11,920,683 | SNP | C/T | 1000GP (CEU) | |
| 8 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 11,741,558 | 12,567,301 | CopyNumber | Variation_3720 (DGV) |
| 8 | 7,219,660 | 12,005,446 | Inversion | Variation_37303 (DGV) |
| 8 | 7,426,605 | 12,450,985 | Inversion | Variation_37304 (DGV) |
| 8 | 7,437,436 | 12,456,008 | Inversion | Variation_37305 (DGV) |
| 8 | 7,451,668 | 12,441,708 | Inversion | Variation_37306 (DGV) |
| 8 | 7,460,958 | 12,435,737 | Inversion | Variation_37307 (DGV) |
| 8 | 7,897,445 | 12,444,758 | Inversion | Variation_37311 (DGV) |
| 8 | 7,901,538 | 12,444,659 | Inversion | Variation_37312 (DGV) |
| 8 | 7,903,571 | 12,438,688 | Inversion | Variation_37313 (DGV) |
| 8 | 7,906,494 | 12,437,216 | Inversion | Variation_37314 (DGV) |
| 8 | 7,993,421 | 12,424,508 | Inversion | Variation_37315 (DGV) |
| 8 | 7,993,425 | 12,429,396 | Inversion | Variation_37316 (DGV) |
| 8 | 8,024,528 | 12,061,148 | Inversion | Variation_37317 (DGV) |
| 8 | 8,024,710 | 12,055,996 | Inversion | Variation_37318 (DGV) |
| 8 | 8,098,045 | 12,324,868 | Inversion | Variation_37319 (DGV) |
| 8 | 8,100,604 | 12,316,276 | Inversion | Variation_37320 (DGV) |
| 8 | 8,113,868 | 12,306,378 | Inversion | Variation_37321 (DGV) |
| 8 | 11,698,747 | 12,551,156 | CopyNumber | Variation_52352 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E158P.aApr07-unspliced | main_exon | 3UTR | chr8 | 11,919,784 | 11,919,896 | - |
| CDS_partial | chr8 | 11,919,896 | 11,920,712 | - | ||