OR7E159P Olfactory Receptor
| Gene Symbol | OR7E159P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR14.5.3P |
| External Ids | HGNC: 31312 GeneBank: NG_004436 |
| Build #39 labels | |
| Chromosomal location | 14:51,771,788-51,772,096 (-) |
| Cluster | 14@52 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by SATR2 repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E108P | 92.08% | 101 |
| OR7E111P | 91.09% | 101 |
| OR7E4P | 91.92% | 99 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Orang | OR7E102E | 86% | 101 |
| Orang | OR7E102 | 83% | 101 |
| Chimp | OR7E130 | 89% | 101 |
| Chimp | OR7E8 | 88% | 101 |
Sequence information
| Nucleotide sequence |
CGGGCGCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCGCTAC CTGTGGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGGACAGACATTGGCGTGTACCTG ACTTCAGCTGTGGCAGCACCCCCCAGGAATGGTGTCGTGGCGTCAGTGATGTACGCTGTG GTCACCCCCATGCTGAACCTTTTCATCTACAGCCAGAGAAACAGGGACATTCAAAGCGCC CTGCGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTCTTGCATCCTTTTTCTTGT GTGGGTAAG |
| Conceptual translation |
RPSILRISSSDGKYKAFATCGSHLAVVCLFY/TDIGVYLTSAVAAPPRNGVVASVMYAV VTPMLNLFIYSQRNRDIQSALRRLRSRTVESHDLLHPFSCVGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 100 | -100 | SNP | G/A | 1000GP (YRI) | |
| 14 | 51,772,046 | 51,772,046 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 14 | 52,238,545 | 52,238,545 | SNP | C/T | rs61970684 (DbSNP) | |
| 14 | 52,238,764 | 52,238,764 | SNP | A/G | rs73298895 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 58 (Hasin) | |||
| 14 | 52,212,766 | 52,246,833 | CopyNumber | Variation_71900 (DGV) |
| 14 | 52,215,384 | 52,239,627 | CopyNumber | Variation_87223 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.