OR7E15P Olfactory Receptor
| Gene Symbol | OR7E15P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | pDJ392a17, OR11-392, OST001, HsOR8.5.2P, ORL3588 |
| External Ids | HGNC: 8386 GeneBank: AF399386, NG_002168 ORDB: ORL3588 |
| Build #39 labels | OR7E80P, OR7E15P, OR7E42P |
| Chromosomal location | 8:12,696,294-12,697,264 (-) |
| Cluster | 8@13 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E26P | 88.2% | 322 |
| OR7E36P | 88.38% | 327 |
| OR7E37P | 88.04% | 326 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 323 |
| Mouse | Or7e177 | 64% | 316 |
| Rat | Or7e173 | 64% | 302 |
| Cow | OR7E186 | 66% | 324 |
| Orang | OR7E14P | 84% | 320 |
| Orang | OR7E12P | 83% | 311 |
| Orang | OR7E53P | 82% | 311 |
| Horse | OR7E225 | 67% | 320 |
| Chimp | OR7E36P | 87% | 323 |
| Chimp | OR7E14P | 87% | 320 |
| Chimp | OR7E33P | 87% | 316 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG197169 |
Sequence information
| Nucleotide sequence |
TTTGAACCCTCTTTCCTAGGCAAAAGGTGTTCAATCTCTACATACCCGCAGAATTTAACA GATGTCTCTTTATTCCTCCTCCTAGAAGCTCAGAGGATCCAGAACAGCAGCCTGTCCTCG CTGGGCTGTTCCTGTCCATGTGCCTGGTCACGGTGCTGGGGAACCTGCTCATCATCCTGG CCGTCAGCCCTGACTCCCACCTCCACACCCCCATGTACCTCTTCCTCTCCAACCTGTCCT TGCCTGACATCGGTTTCACCTCCAGCATGGTCCCCAAGATGATTGTGGACATCTAATCTC ACAGCAGACTCATCTCCTAGGCAGGCTGCCTGACTCCCATGTCTCTCTTTGCCATTTTTG GAGGCATGGAAGAGAGACATGCTCCTGAGTGTGATCCCTATGACCCGTTTGTAGCCATCT GTCACCCTCTATATCATTCAGCCATCATGAACCCGTGTTTCTGTGGCTTTCTAGTTTTGT TGTCTTTTTTTTCTCAGTCTCTTTTAGACGCCCAGGTGCACAACTTGATTGCCTTACAAA TGACCTGCTTCAAGGATGTGGAAATTCCTAATTTCTTCTGGGAACCTTCTCAACTCCCCC ATCTTGCATGTTGCGACACCTTCACCAATAACATAATCATGTATTCCCCTGCTGCCATAT TTGGTTTTCTTCCCATCTCGGGGACCCTTTTCTCTTACTATAAGATTGTTTCCTCCATTC TGAGGGTTTCATCATCAGGTGGGAAGTATAAGGCGTGCTCCACCTGTGGGTCTCACCTGT CAGTTGTTTGCTGATTTTATGGAACAGGCTTTTGGGGGTACCTCAGTTCAGATGTGTCAT CTTCCCCGGGAAAGGCTGCAGTGGCCTCAGTGATGTACACGGTGGTCACCCCCATGCCGA ACCCCTTCATCTACAGCCTGAGAAACAGGGATATTAAAAGTGTCCTGCGGCGGCCGCACG GCAGCACAGTC |
| Conceptual translation |
FEPSFLGKRCSISTYPQNLTDVSLFLLLE/SEDPEQQPVLAGLFLSMCLVTVLGNLLII LAVSPDSHLHTPMYLFLSNLSLPDIGFTSSMVPKMIVDIXHSRLISXGCLTPMSLFAI FGGMEE\MLLSVI/YDPFVAICHPLYHSAIMNPCFCGFLVLLSFFSQSLLDAQVHNLI ALQMTCFKDVEIPNFFWEPSQLPHLACCDTFTNNIIMYSPAAIFGFLPISGTLFSYYKIV SSILRVSSSGGKYKACSTCGSHLSVVCXYGTGFWGYLSSDVSSSPGKAAVASVMYTVVT PMPNPFIYSLRNRDIKSVLRRPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 12,551,624 | 12,551,624 | large insertion | 21991bp insertion | rs72492712 (DbSNP) | |
| 8 | 12,553,833 | 12,553,833 | SNP | A/G | rs596540 (DbSNP) | |
| 8 | 12,554,743 | 12,554,743 | SNP | A/G | rs627342 (DbSNP) | |
| 8 | 12,554,019 | 12,554,019 | SNP | C/G | rs597130 (DbSNP) | |
| 8 | 12,554,649 | 12,554,649 | SNP | C/T | rs626926 (DbSNP) | |
| 8 | 12,554,522 | 12,554,522 | SNP | C/T | rs59442802 (DbSNP) | |
| 8 | 12,554,260 | 12,554,260 | SNP | G/T | rs73550288 (DbSNP) | |
| 8 | 12,554,016 | 12,554,016 | SNP | G/T | rs73665636 (DbSNP) | |
| 8 | 12,697,234 | 12,697,234 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 8 | 12,696,973 | 12,696,973 | SNP | A/T | 1000GP (CHBJPT) | |
| 8 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 12,545,638 | 12,554,743 | CopyNumber | Variation_1768 (DGV) |
| 8 | 11,845,324 | 12,601,971 | CopyNumber | Variation_2736 (DGV) |
| 8 | 11,741,558 | 12,567,301 | CopyNumber | Variation_3720 (DGV) |
| 8 | 11,904,529 | 12,601,971 | CopyNumber | Variation_8596 (DGV) |
| 8 | 12,220,249 | 12,586,261 | CopyNumber | Variation_8597 (DGV) |
| 8 | 12,551,156 | 12,570,199 | CopyNumber | Variation_10238 (DGV), Variation_52366 (DGV) |
| 8 | 12,001,978 | 12,588,283 | CopyNumber | Variation_34527 (DGV) |
| 8 | 12,231,851 | 12,567,977 | CopyNumber | Variation_95262 (DGV) |
| 8 | 12,451,520 | 12,567,977 | CopyNumber | Variation_95265 (DGV) |
| 8 | 12,551,803 | 12,554,873 | Deletion | #21 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E15P.aApr07-unspliced | main_exon | CDS_partial | chr8 | 12,696,798 | 12,697,184 | - |