OR7E160P Olfactory Receptor
| Gene Symbol | OR7E160P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR8.4.3P |
| External Ids | HGNC: 31233 GeneBank: NG_004399 |
| Build #39 labels | |
| Chromosomal location | 8:12,033,617-12,034,642 (-) |
| Cluster | 8@12b |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 90.35% | 342 |
| OR7E145P | 88.89% | 342 |
| OR7E8P | 89.18% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 65% | 331 |
| Mouse | Or7e178 | 62% | 308 |
| Rat | Or7e173 | 57% | 310 |
| Cow | OR7E186 | 63% | 331 |
| Orang | OR7E103P | 89% | 307 |
| Orang | OR7E163P | 88% | 299 |
| Orang | OR7E103BP | 87% | 301 |
| Horse | OR7E225 | 65% | 318 |
| Chimp | OR7E161P | 89% | 320 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E163BP | 87% | 320 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GGGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCGGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG CTGAGGAACCTGCTCAGCATACCGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCACG TAATTCTTCCTCTCCAACCTGTGCTGGGCTGACATGGGTTTCACCTCAGCCACGGTTCCC AAGATGATTGTGGACATGCAGTCACATAGCAGAGTCATCTCTCATGCGGGCTGCCTGACA CAGATGTATTTCTTGGTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGACTGCTTTGTAGACATCTGTGGCCCTCTGCACTATCCAGTCATCGTGAATCCTCAC CTCTGTATCTTCTTCGTCTTGGTGTCCTTTTTCCTCAGCCTGTTGGATTCCCAGCTGCAC AGTTGGATTGTGTTATAACTCACCATCATCAAGAATGTGGAAATCTCTCATTTTGTCTGT GACCCCTCTCAACCTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATA TATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTAT AAAACTGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCTTTCTCC ACCTGTGGCTCTCACCTAGCAGCTGTTTGCTGATTTTATGGAGCAGACATTGTCGTGTAC CTGGCTTCAGCTGTGTCACCACCCCCCAGGAGTGGTGTGGTGGCATCAGTGATGTACGCT GTGGTCACCCCCATGCTGAACCTTTTCATGTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGCGGAGGCTGCGCAGCAGAACAGTGGAATCTCATGATCTGTTCCATCCTTTTTCT TGTGTG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTGPRNLTGVXFLLLGLSEDPELQPVLALLSLSLSMYLVTV LRNLLSIPAVSSDSPLHTPTXFLSNLCWADMGFTSATVPKMIVDMQSHSRVISHAGCLT QMYFLVLFACIEGMLLTVMAYDCFVDICGPLHYPVIVNPHLCIFFVLVSFFLSLLDSQLH SWIVLXTIIKNVEISHFVCDPSQPLKLACSDSVINSIFIYFDSTMFGFLPISGILLSYY KTVPSILRISSSDGKYKAFSTCGSHLAAVCXYGADIVVYLASAVSPPPRSGVVASVMYA VVTPMLNLFMYSLRNRDIQSALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 11,891,658 | 11,891,658 | SNP | A/C | rs9644692 (DbSNP) | |
| 8 | 11,891,593 | 11,891,593 | SNP | A/G | rs4841679 (DbSNP) | |
| 8 | 11,891,905 | 11,891,905 | SNP | A/G | rs4841680 (DbSNP) | |
| 8 | 11,891,984 | 11,891,984 | SNP | A/G | rs4841681 (DbSNP) | |
| 8 | 11,891,617 | 11,891,617 | SNP | A/G | rs11781510 (DbSNP) | |
| 8 | 11,892,052 | 11,892,052 | SNP | A/G | rs9329260 (DbSNP) | |
| 8 | 11,892,059 | 11,892,059 | SNP | A/G | rs9329261 (DbSNP) | |
| 8 | 11,891,805 | 11,891,805 | SNP | A/G | rs56051617 (DbSNP) | |
| 8 | 11,892,020 | 11,892,020 | SNP | C/T | rs9329259 (DbSNP) | |
| 8 | 11,892,090 | 11,892,090 | SNP | C/T | rs62493663 (DbSNP) | |
| 8 | 11,891,329 | 11,891,329 | SNP | C/T | rs4841678 (DbSNP) | |
| 8 | 11,891,669 | 11,891,669 | SNP | G/T | rs36042437 (DbSNP) | |
| 8 | 12,033,795 | 12,033,795 | SNP | G/C | 1000GP (CEU) | |
| 8 | 12,033,820 | 12,033,820 | SNP | C/T | 1000GP (CEU) | |
| 8 | 12,034,149 | 12,034,149 | SNP | A/C | 1000GP (CEU) | |
| 8 | 12,034,396 | 12,034,396 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 8 | 100 | -100 | SNP | G/C | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 11,870,657 | 12,287,699 | InversionBreakpoint | Variation_0349 (DGV) |
| 8 | 11,845,324 | 12,601,971 | CopyNumber | Variation_2736 (DGV) |
| 8 | 11,741,558 | 12,567,301 | CopyNumber | Variation_3720 (DGV) |
| 8 | 11,891,593 | 11,898,209 | CopyNumber | Variation_10237 (DGV), Variation_52354 (DGV), Variation_52355 (DGV) |
| 8 | 7,219,660 | 12,005,446 | Inversion | Variation_37303 (DGV) |
| 8 | 7,426,605 | 12,450,985 | Inversion | Variation_37304 (DGV) |
| 8 | 7,437,436 | 12,456,008 | Inversion | Variation_37305 (DGV) |
| 8 | 7,451,668 | 12,441,708 | Inversion | Variation_37306 (DGV) |
| 8 | 7,460,958 | 12,435,737 | Inversion | Variation_37307 (DGV) |
| 8 | 7,897,445 | 12,444,758 | Inversion | Variation_37311 (DGV) |
| 8 | 7,901,538 | 12,444,659 | Inversion | Variation_37312 (DGV) |
| 8 | 7,903,571 | 12,438,688 | Inversion | Variation_37313 (DGV) |
| 8 | 7,906,494 | 12,437,216 | Inversion | Variation_37314 (DGV) |
| 8 | 7,993,421 | 12,424,508 | Inversion | Variation_37315 (DGV) |
| 8 | 7,993,425 | 12,429,396 | Inversion | Variation_37316 (DGV) |
| 8 | 8,024,528 | 12,061,148 | Inversion | Variation_37317 (DGV) |
| 8 | 8,024,710 | 12,055,996 | Inversion | Variation_37318 (DGV) |
| 8 | 8,098,045 | 12,324,868 | Inversion | Variation_37319 (DGV) |
| 8 | 8,100,604 | 12,316,276 | Inversion | Variation_37320 (DGV) |
| 8 | 8,113,868 | 12,306,378 | Inversion | Variation_37321 (DGV) |
| 8 | 11,698,747 | 12,551,156 | CopyNumber | Variation_52352 (DGV) |
| 8 | 11,788,350 | 11,893,225 | InDel | Variation_43720 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.