OR7E161P Olfactory Receptor
| Gene Symbol | OR7E161P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR8.4.2P |
| External Ids | HGNC: 31234 GeneBank: NG_004315 |
| Build #39 labels | |
| Chromosomal location | 8:11,928,568-11,929,563 (-) |
| Cluster | 8@12a |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 90.06% | 332 |
| OR7E140P | 90.96% | 332 |
| OR7E99P | 90.66% | 332 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 66% | 316 |
| Mouse | Or7e178 | 63% | 308 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 66% | 307 |
| Orang | OR7E103P | 90% | 307 |
| Orang | OR7E163P | 89% | 299 |
| Orang | OR7E163RP | 89% | 299 |
| Horse | OR7E225 | 66% | 318 |
| Chimp | OR7E161BP | 94% | 310 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BI087915 |
Sequence information
| Nucleotide sequence |
CTTTCCTTCTCAAGGTGTCCAAGACACACAGGGCCACGGAATCTCACAGGTGTCTGAGAA TTTCTCCTCTTGGGACTCTCAAAGGATCCAGAACTGCAGCCAGTCCTCGCTTTGCTGTCC CTGTTCCTGTCCATGTATCTGGTCACGGTGCTGAGGAACCTGCTCAGCATTCTGGCTGTT AGCTCTGACTCCCCGCTCCACACTCCCGTGTACTTCTTCCTCTCCAACCTGTGCTGGGCT GACATGGGTTTCACCTCGGCCACGGTTCCCAAGATGATTGTGGACATGCAGCCGCATAGC AGAGTCATCTCTCATGCGGGCTGCCTGACACAGATATCTTTCTTGGTCCGTTTTGCATGT ATAGAAGGCATGCTCCTGACTGTGATGGCCTATGACTGCTTTGTAGCCATCTGTCGCCCT CTGCACTACCCAGTCATCGTGAATCCTCACCTCTGTGTCTTCTTCGTTTTGGTGTCCTTT TTCCTCAGCCTGTTGGATTCCCAGCTGCACAGTTGCATTGTGTTACTATTCACCATCATA AAGACTGTGGAAATCTCTCATTTTGTCTGTGACCCCTCTCAACTTCTCAAACTTGCCTGT TCTGACAGCGTCATCAATAGCGTATTCATATATTTCGATAGTACTATGTTTGGTTTTCTT CCCATTTCAGGGATCCTTTTGTCTTACTATAAAATTGTCCCCTCCATTCTAAGGATTTCA TCATCAGATGAGAAGTATAAAGCCTTCTTCAACTGTGGCTCTCACCTAGCAGTTGTTTGC TGGTTTTAGGGAACAGGCATTGGCATGTACCTGATTTCAGCTGTGTCACCACCCCCCAGG AATGGTGTGGTGGCATCAGTGATGTACACTGTGGTCACCCCCATGCTGAACCTTTTCATC TGCAGCCTGAGAAACAGGGACATACAAAGTGCCCTGCGGAGGCTGCGCAGCAGAACAGTG GAATCTCATGATCTGTTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
LSFSRCPRHTGPRNLTGVXFLLLGLSKDPELQPVLALLSLFLSMYLVTVLRNLLSILAV SSDSPLHTPVYFFLSNLCWADMGFTSATVPKMIVDMQPHSRVISHAGCLTQISFLVRFAC IEGMLLTVMAYDCFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLHSCIVLLFTII KTVEISHFVCDPSQLLKLACSDSVINSVFIYFDSTMFGFLPISGILLSYYKIVPSILRIS SSDEKYKAFFNCGSHLAVVCWFXTGIGMYLISAVSPPPRNGVVASVMYTVVTPMLNLFI CSLRNRDIQSALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 11,786,878 | 11,786,878 | Del(1) | -/C | rs71539749 (DbSNP) | |
| 8 | 11,786,932 | 11,786,932 | SNP | A/C | rs35626932 (DbSNP) | |
| 8 | 11,786,781 | 11,786,781 | SNP | A/G | rs35890869 (DbSNP) | |
| 8 | 11,786,129 | 11,786,129 | SNP | A/G | rs12719914 (DbSNP) | |
| 8 | 11,787,010 | 11,787,010 | SNP | A/G | rs34937417 (DbSNP) | |
| 8 | 11,786,902 | 11,786,902 | SNP | A/G | rs35890885 (DbSNP) | |
| 8 | 11,786,255 | 11,786,255 | SNP | A/G | rs12719915 (DbSNP) | |
| 8 | 11,786,947 | 11,786,947 | SNP | A/G | rs73552492 (DbSNP) | |
| 8 | 11,786,893 | 11,786,893 | SNP | A/G | rs34012738 (DbSNP) | |
| 8 | 11,786,465 | 11,786,465 | SNP | C/T | rs73552490 (DbSNP) | |
| 8 | 11,786,205 | 11,786,205 | SNP | C/T | rs11774505 (DbSNP) | |
| 8 | 11,786,925 | 11,786,925 | SNP | C/T | rs36029352 (DbSNP) | |
| 8 | 11,786,974 | 11,786,974 | SNP | C/T | rs55989623 (DbSNP) | |
| 8 | 11,928,746 | 11,928,746 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 8 | 11,928,843 | 11,928,843 | SNP | A/G | 1000GP (CEU) | |
| 8 | 11,929,384 | 11,929,384 | SNP | A/G | 1000GP (CEU) | |
| 8 | 11,929,393 | 11,929,393 | SNP | A/G | 1000GP (CEU) | |
| 8 | 11,929,423 | 11,929,423 | SNP | C/A | 1000GP (CEU) | |
| 8 | 11,929,465 | 11,929,465 | SNP | C/T | 1000GP (CEU) | |
| 8 | 11,929,482 | 11,929,482 | SNP | T/C | 1000GP (CEU) | |
| 8 | 11,929,501 | 11,929,501 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 8 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 11,741,558 | 12,567,301 | CopyNumber | Variation_3720 (DGV) |
| 8 | 7,219,660 | 12,005,446 | Inversion | Variation_37303 (DGV) |
| 8 | 7,426,605 | 12,450,985 | Inversion | Variation_37304 (DGV) |
| 8 | 7,437,436 | 12,456,008 | Inversion | Variation_37305 (DGV) |
| 8 | 7,451,668 | 12,441,708 | Inversion | Variation_37306 (DGV) |
| 8 | 7,460,958 | 12,435,737 | Inversion | Variation_37307 (DGV) |
| 8 | 7,897,445 | 12,444,758 | Inversion | Variation_37311 (DGV) |
| 8 | 7,901,538 | 12,444,659 | Inversion | Variation_37312 (DGV) |
| 8 | 7,903,571 | 12,438,688 | Inversion | Variation_37313 (DGV) |
| 8 | 7,906,494 | 12,437,216 | Inversion | Variation_37314 (DGV) |
| 8 | 7,993,421 | 12,424,508 | Inversion | Variation_37315 (DGV) |
| 8 | 7,993,425 | 12,429,396 | Inversion | Variation_37316 (DGV) |
| 8 | 8,024,528 | 12,061,148 | Inversion | Variation_37317 (DGV) |
| 8 | 8,024,710 | 12,055,996 | Inversion | Variation_37318 (DGV) |
| 8 | 8,098,045 | 12,324,868 | Inversion | Variation_37319 (DGV) |
| 8 | 8,100,604 | 12,316,276 | Inversion | Variation_37320 (DGV) |
| 8 | 8,113,868 | 12,306,378 | Inversion | Variation_37321 (DGV) |
| 8 | 11,698,747 | 12,551,156 | CopyNumber | Variation_52352 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E161P.aApr07-unspliced | main_exon | CDS_partial | chr8 | 11,928,768 | 11,929,542 | - |