OR7E163P Olfactory Receptor
| Gene Symbol | OR7E163P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 45040 |
| Build #39 labels | |
| Chromosomal location | 4:3,889,303-3,890,327 (-) |
| Cluster | 4@4a |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 331 |
| Mouse | Or7e178 | 64% | 310 |
| Rat | Or7e173 | 61% | 310 |
| Cow | OR7E186 | 65% | 329 |
| Orang | OR7E103P | 92% | 299 |
| Orang | OR7E163RP | 91% | 299 |
| Horse | OR7E225 | 67% | 318 |
| Chimp | OR7E163MP | 90% | 320 |
| Chimp | OR7E115P | 89% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | GD262110 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATACTCTTTCCTTCTCAAGGTGTTCAAGACACACA GAGCCACAGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCGGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTACCTGGTCACGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCCGCTCTGACTCCCCCCTCCACACCCCCATG TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGGCCACGGTTCCC AAGATGATTGTGGAATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGCCTGACGC AGATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGACATGTTCCTGACTGTGATGGCCT ATGACTGCTTTGTAGCCATCTGTCACCCTCTGCACTACCCAGTCATCGTGAATCCTCACC TCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCATA GCTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAGTCTCTAATTTTGTCTGTG ACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATAT ATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTGGTCTTACTATA AAATCATCCCCTACATTCTCAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCGCCA CCTGTGGCTCTCACCTGGCAGTTGTTTGCTGATTTTATGGAACAGGCATTGGCATGTACC TGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCATCAGTGATGTACGCTG TGGTCACCCCCATGCTGAACCTTTTTATCTACAGCCTGAGAAACAGGGACATACAAAGTG CCCTGCGGAGGCTGCGCCCCAGAACAGTCAAATCT |
| Conceptual translation |
LVFIFYFSNTLSFSRCSRHTEPQNLTGV*EFLLLGLSEDPELQPVLALLSLSLSMYLVTV LRNLLSILAVRSDSPLHTPMYFFLSNLCWADIGFTSATVPKMIV/MQSHSRVISHAGCL TQMSFLVLFACIEDMFLTVMAYDCFVAICHPLHYPVIVNPHLCVFFVLVSFFLSLLDSQL HSWIVLQFTIIKNVEVSNFVCDPSQLLKLACSDSVINSIFIYFDSTMFGFLPISGILWSY YKIIPYILRISSSDGKYKAFATCGSHLAVVC*FYGTGIGMYLTSAVSPPPRNGVVASVMY AVVTPMLNLFIYSLRNRDIQSALRRLRPRTVKS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 3,891,406 | 3,891,406 | SNP | C/T | rs71595724 (DbSNP) | |
| 4 | 3,891,822 | 3,891,822 | SNP | G/T | rs28491430 (DbSNP) | |
| 4 | 3,891,887 | 3,891,887 | SNP | A/G | rs35077084 (DbSNP) | |
| 4 | 3,892,037 | 3,892,037 | SNP | A/G | rs34152571 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 4 | 3,394,344 | 4,350,986 | CopyNumber | Variation_3477 (DGV) |
| 4 | 3,823,172 | 4,262,068 | InversionBreakpoint | Variation_0346 (DGV) |
| 4 | 3,883,177 | 3,946,410 | CopyNumber | Variation_80151 (DGV), Variation_91886 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.