OR7E16P Olfactory Receptor
| Gene Symbol | OR7E16P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | CIT-B-440L2, OR19-11, OR19-133, OR19-9, HsOR19.2.9P, ORL3782 |
| External Ids | HGNC: 8387 GeneBank: AF399399, BK004546, NG_002189, U86252 ORDB: ORL3782 |
| Build #39 labels | OR7E16P |
| Chromosomal location | 19:9,191,236-9,192,155 (+) |
| Cluster | 19@9b |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E109P | 84.12% | 296 |
| OR7E14P | 85.37% | 294 |
| OR7E31P | 82.71% | 295 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 74% | 305 |
| Mouse | Or7e178 | 70% | 307 |
| Rat | Or7e177 | 69% | 290 |
| Cow | OR7E186 | 71% | 304 |
| Orang | OR7E14P | 84% | 294 |
| Orang | OR7E13P | 83% | 298 |
| Orang | OR7E109P | 82% | 296 |
| Horse | OR7E225 | 71% | 304 |
| Chimp | OR7E14P | 85% | 294 |
| Chimp | OR7E36P | 83% | 299 |
Sequence information
| Nucleotide sequence |
GAAGAGATATTATGAATAATATCCCAGCATGTACACACAGGGTGTGTACAGATTAAGAAC TGCAGCCCATCCTCTTTGGGCTGTTCCTGTCCATGTGCCTGGTCATGGTGCTGGGGAACC TTCTCATCATCCTGGCCGTCAGCTCTGACTCCCACCTCCACACCCCCACGTACTTTTTCC TCTCCAACCTGTCCTTGGCTGACATCGGTTTCCCCTCCACCACTGTCCCCAAGATGATTG TGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCGGGCTGCCTGACTCAGATATCTC TTTTTGCTGTTTTTGGATGCATGGAAGACATGCTTCTGAGTGTGATGGCTTATGACCGGT TTGTGGCCATCTGTCACCCTCTGGATTATCCAGTCATCATGAACCCATGTTTCTGTGGCT TCCTGGTTTTGTTGTCTTTTTTTTCTCAGTCTTTTAGACTTCCAGCTGCACAATTGGATT GCCTTACAAATTACCTGCTTCAAGGATGTGGAAATTCCCAGTTTCTTCTGTGACCCTTCT CAACTCCCCCACCTTGCCTGTTGTGACACCTTCACCAACAACATAGTCATGTATTTCCTT GCTGCCATACTTGGTTTTCTTCCCATCTCGGGGATCTTTTCTCTTACTATAAAATTGTTT CCTCCATTCTGAAGGTTTCATCATCAGGTGGGAAGTATAAAGCCTTCTCCACCTGTGGCT CTCACCTGTCAGTTGTTTGCTTATTTTATGGAACAGCCCTTGGAGGGTACCTCAGTTCAG ACATGTCCTCTTATCCCAGAAAGGGTGCAGTGGCTTCAGTGATGTACACAGTGGTCGCCC CCATGCTGAACCCGTTCATCTACAGCCTGAGAAAAAGGGACATTAAAAGTGCCCTGCAGC AGCTGCATGGCAGAATAGTC |
| Conceptual translation |
EEILXISQHVHTG/CTDXLQPILFGLFLSMCLVMVLGNLLIILAVSSDSHLHTPTYF FLSNLSLADIGFPSTTVPKMIVDIQSHSRVISYAGCLTQISLFAVFGCMEDMLLSVMAYD RFVAICHPLDYPVIMNPCFCGFLVLL\FFLSLLDFQLHNWIALQITCFKDVEIPSFFCD PSQLPHLACCDTFTNNIVMYFLAAILGFLPISG/LFSYYKIVSSILKVSSSGGKYKAFS TCGSHLSVVCLFYGTALGGYLSSDMSSYPRKGAVASVMYTVVAPMLNPFIYSLRKRDIKS ALQQLHGRIV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | G/C | 1000GP (YRI, YRI, YRI, YRI, YRI) | |
| 19 | 9,191,279 | 9,191,279 | SNP | G/C | 1000GP (CEU, CHBJPT) | |
| 19 | 9,191,318 | 9,191,318 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 19 | 9,191,467 | 9,191,467 | SNP | A/G | 1000GP (CHBJPT) | |
| 19 | 9,301,955 | 9,301,955 | SNP | C/G | rs68119574 (DbSNP) | |
| 19 | 9,301,994 | 9,301,994 | SNP | G/T | rs2005850 (DbSNP) | |
| 19 | 9,302,144 | 9,302,144 | SNP | A/G | rs2005851 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 26 (Hasin) | |||
| 19 | 9,267,749 | 9,313,321 | CopyNumber | Variation_35700 (DGV) |
| 19 | 9,271,324 | 9,311,170 | CopyNumber | Variation_35701 (DGV) |
| 19 | 9,295,591 | 9,317,125 | CopyNumber | Variation_50243 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.