OR7E18P Olfactory Receptor
| Gene Symbol | OR7E18P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR19-14, TPCR26, HsOR19.2.15P, ORL210 |
| External Ids | HGNC: 8389 GeneBank: HSTPCR26P, NG_004360 ORDB: ORL210 |
| Build #39 labels | OR7E98P, OR7E18P |
| Chromosomal location | 19:9,260,977-9,261,797 (-) |
| Cluster | 19@9b |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E16P | 91.94% | 248 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 74% | 246 |
| Mouse | Or7e178 | 69% | 248 |
| Rat | Or7e177 | 67% | 248 |
| Cow | OR7E186 | 74% | 239 |
| Orang | OR7E16P | 87% | 248 |
| Horse | OR7E225 | 72% | 254 |
| Chimp | OR7E14P | 81% | 264 |
| Chimp | OR7E36BP | 83% | 254 |
| Chimp | OR7E36P | 83% | 253 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | X89673 |
Sequence information
| Nucleotide sequence |
ATCCAATGCAAGGGCTAATAGAAGTGAATTAAGACATTCTCTGTAACTCCAATATTAAAT GGAAACCGGGAAATAGCCAGATTCCTCTCCAACCTGTCCTTGGCTGGCATCGGTTTCCCC TCCACCATAGTCTCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTAT GCGGGCTGCCTGACTCAGGTATCTCTTTTTGCCGTTTTTGGATGCATGGAAGACATGCTT CTGAGTGTGATGGCTTATGACCGGTTTGTGGACATCTGTCACCCTCTGGATTATCCAGTC ATCATGAACCCATGTTTCTGTGGCTTCCTAGTTTTGTTGTCTTTTTTTCTCAGTCTTTTA GACTCCCAGCTGCACAATTGGATTGCCTTACAAATTACCTGCTTCAAGGATGTGGAAATT CCCAATTTCTTCTGTGACCCTTCTCAACTCCCCCACCCTTGCCTGTTGTGACACCTTCAC CAATGACATAGTCATGTATTTCCTTGCTGCCATATTTGGTTTTCTTCCCATTTCGGGGAC CTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAG TATAAAGCCTTCTCCACCTGTGGCTCTCACCTGTCAGTTGTTTGCTTATTTTATGGAACA GGCTTTGGAGGGGACCTCAGTTCAGACATGTCCTCTTATCCCAGAAAAGGTGCAGTGGCC TCAGTGATGTACACGGTGGTTACTCCCATGCTGAACCCCTTCATCTACAGCCTAACAGGG AAATTAAAAGTGCCCTGCGGCAGCTGCACTGCAGAATAGTC |
| Conceptual translation |
IQCKGXKXKTFSVTPILNGNREIARFLSNLSLAGIGFPSTIVSKMIVDIQSHSRVISY AGCLTQVSLFAVFGCMEDMLLSVMAYDRFVDICHPLDYPVIMNPCFCGFLVLLSFFLSLL DSQLHNWIALQITCFKDVEIPNFFCDPSQLPH\ACCDTFTNDIVMYFLAAIFGFLPISG /LFSYYKIVSSILRVSSSGGKYKAFSTCGSHLSVVCLFYGTGFGGDLSSDMSSYPRKGA VASVMYTVVTPMLNPFIYSL/REIKSALRQLHCRIV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | A/G | 1000GP (YRI) | |
| 19 | 9,261,143 | 9,261,143 | SNP | C/T | 1000GP (CHBJPT) | |
| 19 | 9,372,161 | 9,372,161 | SNP | A/G | rs8104515 (DbSNP) | |
| 19 | 9,372,292 | 9,372,292 | SNP | A/G | rs62103650 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 19 | 9,369,653 | 9,372,573 | Deletion | #294 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E18P.aApr07-unspliced | main_exon | CDS_partial | chr19 | 9,261,054 | 9,261,525 | - |