OR7E1P Olfactory Receptor
| Gene Symbol | OR7E1P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | AC004923, HsOR11.14.3P, ORL3537 |
| External Ids | HGNC: 8391 GeneBank: NG_004307 ORDB: ORL3537 |
| Build #39 labels | OR7E1P |
| Chromosomal location | 11:67,974,235-67,975,257 (-) |
| Cluster | 11@68 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| 90.64% | 342 | |
| OR7E129P | 94.44% | 342 |
| OR7E87P | 92.35% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 331 |
| Mouse | Or7e178 | 63% | 310 |
| Rat | Or7e173 | 60% | 309 |
| Cow | OR7E186 | 65% | 329 |
| Orang | OR7E103P | 90% | 307 |
| Orang | OR7E103BP | 89% | 301 |
| Horse | OR7E225 | 65% | 330 |
| Chimp | OR7E163P | 89% | 320 |
| Chimp | OR7E163MP | 89% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E115P | 88% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA219029 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTGCTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGACCCA GAACTGCAGCCTATCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCTGCTCTGACTCCCCCCTCCACACCCCCAGG TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCCGCCACGGTTCCC AAGATGATTGTGGACATGCAGTCGCATAGCAGAGTCACGTCTCATGCGGGCTGTCTGACG CAGATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC CTCTGTGTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACAGT TGGATTGTGTTACAATTCACCATCGTCTAGAATTTGGAAATCTCTAATTTTGTCTGTGAC CCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATATAT TTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTATGGTCTTACTATAAA ATCATCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCCACC TGTGGCTCTCACCTAGCCGTTGTTTGCTGATTTTATGGAACAGGCATTGGCATGTACCTG ACTTCAGCTGTGTCACAACCCCCCAGGAATGGTGTGGTGGCATCAGTGATGTATGCTGTG GTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGAACATACAAAGTGCC CTGTGGAGGCTGCACAGCACAACAGTCGAATCTCATGATTTGTTCCATCCTTTCTCTTGT GTG |
| Conceptual translation |
LVFICYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLSEDPELQPILALLSLSLSMYLVTV LRNLLSILAVCSDSPLHTPRYFFLSNLCWADIGFTSATVPKMIVDMQSHSRVTSHAGCLT QMSFLVLFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHLCVFVLVSFFLSLLDSQLHS WIVLQFTIVXLEISNFVCDPSQLLKLACSDSVINSIFIYFDSTMFGFLPISGILWSYYK IIPSILRISSSDGKYKAFSTCGSHLAVVCXYGTGIGMYLTSAVSQPPRNGVVASVMYAV VTPMLNLFIYSLRNRNIQSALWRLHSTTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 67,741,865 | 67,741,864 | Ins(1) | -/G | rs36114354 (DbSNP) | |
| 11 | 67,742,354 | 67,742,354 | SNP | A/C | rs11228105 (DbSNP) | |
| 11 | 67,742,518 | 67,742,518 | SNP | A/C/T | rs4014567 (DbSNP) | |
| 11 | 67,742,610 | 67,742,610 | SNP | A/G | rs73503290 (DbSNP) | |
| 11 | 67,742,490 | 67,742,490 | SNP | C/A | rs2375190 (DbSNP) | |
| 11 | 67,742,597 | 67,742,597 | SNP | C/A | rs2889016 (DbSNP) | |
| 11 | 67,741,749 | 67,741,749 | SNP | C/G | rs308331 (DbSNP) | |
| 11 | 67,742,005 | 67,742,005 | SNP | C/T | rs12221502 (DbSNP) | |
| 11 | 67,742,273 | 67,742,273 | SNP | G/A | rs4014572 (DbSNP) | |
| 11 | 67,742,375 | 67,742,375 | SNP | G/A | rs2375192 (DbSNP) | |
| 11 | 67,742,531 | 67,742,531 | SNP | G/A | rs3953723 (DbSNP) | |
| 11 | 67,742,436 | 67,742,436 | SNP | G/A | rs4014568 (DbSNP) | |
| 11 | 67,742,361 | 67,742,361 | SNP | G/A | rs4014570 (DbSNP) | |
| 11 | 67,742,369 | 67,742,369 | SNP | T/C | rs4014569 (DbSNP) | |
| 11 | 67,742,596 | 67,742,596 | SNP | T/C | rs3953722 (DbSNP) | |
| 11 | 67,742,275 | 67,742,275 | SNP | T/G | rs3953724 (DbSNP) | |
| 11 | 67,742,326 | 67,742,326 | SNP | T/G | rs4014571 (DbSNP) | |
| 11 | 67,742,382 | 67,742,382 | SNP | T/G | rs2375191 (DbSNP) | |
| 11 | 67,974,278 | 67,974,278 | SNP | G/C | 1000GP (CEU, CHBJPT) | |
| 11 | 67,974,765 | 67,974,765 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 11 | 67,974,777 | 67,974,777 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 67,974,920 | 67,974,920 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 67,975,047 | 67,975,047 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 67,472,905 | 67,891,289 | CopyNumber | Variation_2931 (DGV) |
| 11 | 67,524,937 | 67,859,490 | CopyNumber | Variation_3856 (DGV) |
| 11 | 67,501,626 | 67,748,817 | CopyNumber | Variation_10366 (DGV), Variation_48875 (DGV) |
| 11 | 67,448,219 | 67,765,961 | CopyNumber | Variation_85827 (DGV) |
| 11 | 67,742,645 | 67,742,888 | Ins(10) | #7(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.