OR7E21P Olfactory Receptor
| Gene Symbol | OR7E21P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR4DG, OST035, OR3-12, HsOR3.6.2P, ORL4096 |
| External Ids | HGNC: 8393 GeneBank: BK004795, NG_004123 ORDB: ORL4096 |
| Build #39 labels | OR7E21P, OR7E127P |
| Chromosomal location | 3:130,034,489-130,035,542 (-) |
| Cluster | 3@130 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E53P | 89.18% | 342 |
| OR7E59P | 87.54% | 321 |
| OR7E84P | 87.54% | 321 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 65% | 336 |
| Mouse | Or7e178 | 64% | 316 |
| Rat | Or7e173 | 61% | 311 |
| Cow | OR7E186 | 62% | 338 |
| Orang | OR7E84BP | 82% | 328 |
| Orang | OR7E12P | 84% | 317 |
| Orang | OR7E14P | 81% | 328 |
| Orang | OR7E53P | 83% | 317 |
| Horse | OR7E225 | 64% | 321 |
| Chimp | OR7E53P | 83% | 335 |
| Chimp | OR7E36P | 83% | 328 |
| Chimp | OR7E53CP | 86% | 313 |
| Chimp | OR7E59P | 84% | 318 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA815433 |
Sequence information
| Nucleotide sequence |
TTGTTTCCGATTTTGCAACCCTCTTTTCCAGGCAAAAGAGGGTCGTATCCAAACGATACA GACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCGAACTCTCAGAGGATCCA GAACTGCAGCCGGTCGTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACGGTGCTGGGG AACCTGCTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCCCACCCCCATGTACTTC TTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCACGGTCCCCAAGATG AGCGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTGACTCAGATG TCTCTCTTTGCCATTTTTGGAGGCATGGAAGAGAGACATGCTCCTGAGGTGATGGCCTAT GACCTGTTTGTAGCCATCTGTCACCTTCTATATCGTTCAGCCATCTTGAACCCGTTTGTC CGTGGCTTCCTAGATTTGTTGTCTTTGTTGTTGGTTTTTTTTTTTTTTCTCTCAGTCTTT TAGACTCCCAGCTGCACAACTTGATTGCCTTACAAATGACCTACTTCAAGGATGTGGAAA TTCCTAATTTCTTCTGGGAACCTTCTCAACTCCCCCATCTTGCATGTTGTGACACCTTCA CCAGGAACAACAACATGTATTTCCCTGCTGCCGTATTTGGTTTTCTTCCCATCTCGGGGA CCCTTTTCTCTTACTGTAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGA AGTACAAACCTTCTCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTATGGAGC AGGCGTTGGAGGGTACCTTGGTTCAGATGTGTCATCTTCCCCGAGAAAGGGTGCAGTGGC CTCAGTGACGTACGTACACGGTGGTCACCCCCATGCTGAACTCCTTCATCTACAGCCTGA GAAACGGGGATATTAAAAGTGTCCTACGGCGGCCGCATGGCAGCACAGTCTAATCTCAAT ACGTTCTTATCTGTTCCATTCCTTTTGTAGGGTG |
| Conceptual translation |
LFPILQPSFPGKRGSYPNDTDPQSLTDVSIFLLLELSEDPELQPVVAGLFLSMCLVTVLG NLLIILAVSPDSHLPTPMYFFLSNLSLPDIGFTSTTVPKMSVDIQSHSRVISYAGCLTQM SLFAIFGGMEERHAPEVMAYDLFVAICHLLYRSAILNPFVRGFL\CCLCCWFFFFF\S LLDSQLHNLIALQMTYFKDVEIPNFFWEPSQLPHLACCDTFTRNNNMYFPAAVFGFLPIS GTLFSYCKIVSSILRVSSSGGKYK/FSTCGSHLSVVCXYGAGVGGYLGSDVSSSPRKG AVASVTYVH\VTPMLNSFIYSLRNGDIKSVLRRPHGSTVXQYVL/LFHSFCRV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 3 | 129,753,775 | 129,753,775 | SNP | A/G | rs4330293 (DbSNP) | |
| 3 | 129,753,772 | 129,753,772 | SNP | A/G | rs4330292 (DbSNP) | |
| 3 | 129,754,134 | 129,754,134 | SNP | A/G | rs60911235 (DbSNP) | |
| 3 | 129,754,030 | 129,754,030 | SNP | A/T | rs57241049 (DbSNP) | |
| 3 | 129,754,031 | 129,754,031 | SNP | C/G | rs59587362 (DbSNP) | |
| 3 | 129,753,400 | 129,753,400 | SNP | C/T | rs4484231 (DbSNP) | |
| 3 | 129,754,082 | 129,754,082 | SNP | C/T | rs35334056 (DbSNP) | |
| 3 | 129,754,265 | 129,754,265 | SNP | C/T | rs35668549 (DbSNP) | |
| 3 | 130,034,557 | 130,034,557 | SNP | T/C | 1000GP (CEU) | |
| 3 | 130,035,014 | 130,035,014 | SNP | G/A | 1000GP (CEU) | |
| 3 | 130,035,518 | 130,035,518 | SNP | A/T | 1000GP (CEU) | |
| 3 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 3 | 129,709,647 | 129,939,373 | CopyNumber | Variation_2472 (DGV) |
| 3 | 129,659,467 | 129,939,982 | CopyNumber | Variation_3448 (DGV) |
| 3 | 129,741,603 | 129,811,401 | CopyNumber | Variation_36060 (DGV) |
| 3 | 129,749,665 | 129,829,487 | CopyNumber | Variation_36061 (DGV) |
| 3 | 129,752,787 | 129,813,466 | CopyNumber | Variation_36062 (DGV) |
| 3 | 129,717,806 | 129,811,929 | CopyNumber | Variation_91539 (DGV) |
| 3 | 129,721,138 | 129,754,286 | CopyNumber | Variation_91540 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.