OR7E22P Olfactory Receptor
| Gene Symbol | OR7E22P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR3.6, OR6DG, HsOR3.2.2P, ORL3152 |
| External Ids | HGNC: 8394 GeneBank: AF399422, NG_004122 ORDB: ORL3152 |
| Build #39 labels | OR7E22P |
| Chromosomal location | 3:75,356,485-75,357,510 (-) |
| Cluster | 3@75 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E108P | 86.84% | 342 |
| OR7E116P | 86.84% | 342 |
| OR7E4P | 85.59% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 329 |
| Mouse | Or7e178 | 65% | 308 |
| Rat | Or7e173 | 63% | 307 |
| Cow | OR7E186 | 65% | 327 |
| Orang | OR7E100P | 85% | 313 |
| Orang | OR7E111CP | 82% | 317 |
| Horse | OR7E225 | 68% | 319 |
| Chimp | OR7E22 | 93% | 290 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | CN479152 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTTCTTCTCAAGGCGTCCAAGTCACACA GAGCCACGGAATCTCACGGGTGTCTGAGAATTCCTCCTCCTGGGAATCTCAGAGGATCCA GAACTGCAGCCCGTCCTCGCTGGGCTGACCCTGTCCATGTACCTGGTCACGGTGCTGAGG AACCTGCTCATCATCCTGGCTGTCAGCTCTGACTCCCACCTCCACACCTCCATGTACTTC GTCCTCTCCAACCTGCGCTGGGTTGACATCGGTTTCACCTCGGCCACGGTTCCCAAGATG ATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTATGCGGGCTGCCTGACACAGATG TCTTTCTTGGTCTTTTTTGCATGTATAGAAGACATGCTCCTGACTGTGATGTCCTATGAC CAATTTTTGGCCATCTGTCACCCCCTGCACTACCCAGTCATCGTGAATCCTCACTTCTGT GTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCATAGATGG ATTGTGTTACAATTCACCTTCTTCAAGAATGTGGAAATCTCTAATTTTGTCTGTGAGCCA TCTCAACTTCTCAACCTTGCCTGTTCTGACAGCGTCATCAATATCATATTCATATATTTA GATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTATAAAATT GTCCCCTCCATTCTAAGGATGTCATTGTCAGATGTGAAGTATAAAGCCTTCTCCACCTGT GGCTCTCACCTGGCAGTTTTTTGCTTATTTTACGGAGCAGGCATTGGCGTGTACCTGACT TCAGCTGTGTCACCACCTTCCGGCAATGGTGTGGTGGCTTCAGTGATGTACACTGTGGTC ACCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAACAGGGACATTCAAAGTGCCCCG TGGAGGCTGCGCAGCACAACAGTTGAATCTCATGATCTCTTCCATCCTTTTTCTTGTGTC TGTAAG |
| Conceptual translation |
LVFIFYFSNPLFFSRRPSHTEPRNLTGVXFLLLGISEDPELQPVLAGLTLSMYLVTVLR NLLIILAVSSDSHLHTSMYFVLSNLRWVDIGFTSATVPKMIVDMQSHSRVISYAGCLTQM SFLVFFACIEDMLLTVMSYDQFLAICHPLHYPVIVNPHFCVFLVLVSFFLSLLDSQLHRW IVLQFTFFKNVEISNFVCEPSQLLNLACSDSVINIIFIYLDSTMFGFLPISGILLSYYKI VPSILRMSLSDVKYKAFSTCGSHLAVFCLFYGAGIGVYLTSAVSPPSGNGVVASVMYTVV TPMLNPFIYSLRNRDIQSAPWRLRSTTVESHDLFHPFSCVCK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 3 | 75,406,178 | 75,406,178 | SNP | A/G | rs17028339 (DbSNP) | |
| 3 | 75,406,278 | 75,406,278 | SNP | A/G | rs72501844 (DbSNP) | |
| 3 | 75,406,453 | 75,406,453 | SNP | A/G | rs71319888 (DbSNP) | |
| 3 | 75,405,944 | 75,405,944 | SNP | A/T | rs57337325 (DbSNP) | |
| 3 | 75,405,815 | 75,405,815 | SNP | C/G | rs17028240 (DbSNP) | |
| 3 | 75,406,584 | 75,406,584 | SNP | C/T | rs34054461 (DbSNP) | |
| 3 | 75,406,554 | 75,406,554 | SNP | G/T | rs59829469 (DbSNP) | |
| 3 | 75,356,650 | 75,356,650 | SNP | G/A | 1000GP (CEU) | |
| 3 | 75,357,433 | 75,357,433 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 3 | 75,357,446 | 75,357,446 | SNP | G/C | 1000GP (CEU) | |
| 3 | 75,356,664 | 75,356,664 | SNP | C/G | 1000GP (CHBJPT) | |
| 3 | 75,357,044 | 75,357,044 | SNP | T/C | 1000GP (CHBJPT) | |
| 3 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 3 | 75,392,078 | 76,003,036 | CopyNumber | Variation_2462 (DGV) |
| 3 | 75,346,159 | 75,619,247 | CopyNumber | Variation_3433 (DGV) |
| 3 | 75,244,279 | 75,595,933 | CopyNumber | Variation_5366 (DGV) |
| 3 | 75,250,088 | 75,853,296 | CopyNumber | Variation_5367 (DGV) |
| 3 | 75,392,373 | 75,776,083 | CopyNumber | Variation_8986 (DGV) |
| 3 | 75,392,078 | 75,639,910 | CopyNumber | Variation_8987 (DGV) |
| 3 | 75,392,373 | 75,676,582 | CopyNumber | Variation_34587 (DGV) |
| 3 | 75,379,085 | 75,428,675 | CopyNumber | Variation_51163 (DGV) |
| 3 | 75,382,434 | 75,506,050 | CopyNumber | Variation_51164 (DGV) |
| 3 | 75,382,434 | 75,568,219 | CopyNumber | Variation_51165 (DGV) |
| 3 | 75,391,759 | 75,568,219 | CopyNumber | Variation_51166 (DGV) |
| 3 | 75,388,161 | 75,568,219 | CopyNumber | Variation_53840 (DGV) |
| 3 | 75,381,808 | 75,700,055 | CopyNumber | Variation_63499 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E22P.aApr07-unspliced | main_exon | 3UTR | chr3 | 75,356,453 | 75,356,485 | - |
| CDS_partial | chr3 | 75,356,485 | 75,357,160 | - | ||