OR7E23P Olfactory Receptor
| Gene Symbol | OR7E23P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR21-3, HsOR21.2.1P, ORL3801 |
| External Ids | HGNC: 8395 GeneBank: AF399396, NG_004368 ORDB: ORL3801 |
| Build #39 labels | OR7E92P, OR7E23P |
| Chromosomal location | 21:32,621,061-32,622,043 (+) |
| Cluster | 21@34 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E109P | 90.26% | 308 |
| OR7E31P | 88.22% | 314 |
| OR7E36P | 87.73% | 326 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 70% | 322 |
| Mouse | Or7e177 | 65% | 318 |
| Rat | Or7e173 | 64% | 310 |
| Cow | OR7E186 | 67% | 323 |
| Orang | OR7E15P | 87% | 319 |
| Orang | OR7E14P | 86% | 319 |
| Horse | OR7E225 | 69% | 318 |
| Chimp | OR7E36P | 86% | 322 |
| Chimp | OR7E14P | 87% | 319 |
| Chimp | OR7E38P | 84% | 320 |
| Chimp | OR7E33P | 84% | 315 |
Sequence information
| Nucleotide sequence |
TTTCAACCCTCTTTTCTAAGCAAAAGATGTCCAAACTATACAGACCCACAGAATCTAACA GATGTCTTTATATTCCTCCTCCTAGAACTCTCAGAGGATCCAGCACTGCAGCTGGTCGTC ACTGGGCTGTGCCTGTGTGCCTGGTCACGGTGCTGTGGAACCTGCTCAGCATCCTGGCCG TCAGCCCTGACTCCCACCTCCACACCCCCATGCACTTCTTCCTCTGCAACCTGTCCTTGC CTGACATCGGTTTCACCTCCACCACGGTCCCCAAGATGATCGTGGACATCCAATCTCACA GCAGAGTCATCTCCTATGCAGGCTGCCTGACTCAGATGTCTCTCTCTGCCATTTTTGGAG GCATGGAAGAGAGACATGCTCCTGAGTGTGATGGCCTATGACCAGTTTGTAGCCATCTGT CACCCTCTGTATCATTCAGCCATCATGAACCCGTGTTTCTGTGGCTTCCTGGTTTTGTTG TCTTTTTTTTTCTCAGTCTTTTAGACTCCCAGCTGCAAAACTTGATCGCCTTACAAATCA CCTGCTTCAAGGATGTGGAAATTCCTAATTTCTTCTGTGACCCTTCTCAACTCCCCCATC TTGCATGTTGTGACACCTTCACCAATAACATTATCATGTATTTCCCTGCTGCCATATTTG GTTTTCTTCCCATCTCGGGGACCCTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGA GGGTTTCATCATCAGGTGGGAGCTATAAAGCCTTCGCCACCTGTGGATCTCACCTGTCAG TTGTTTGCTGATTTTATGGAACAGGCGTTGGAGGGTACCTCAGTTCAGATGTGTCGTCTT CCCTGAGAAAGCGTGCAGTGGCCTCAGTGATGTACACAGTGGTCACCCCCATGCTGAATC CCTTGATCTACAGCCTGAGAAACAGGGATATTAAAGGTGTCCTGTGGCAGCCGTGCAGCC GCACGGCAGCACAGTCTCATCTC |
| Conceptual translation |
FQPSFLSKRCPNYTDPQNLTDVFIFLLLELSEDPALQLVVTGLCL/CLVTVLWNLLSIL AVSPDSHLHTPMHFFLCNLSLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLSAIF GGMEE\MLLSVMAYDQFVAICHPLYHSAIMNPCFCGFLVLL/FFFLSLLDSQLQNLIA LQITCFKDVEIPNFFCDPSQLPHLACCDTFTNNIIMYFPAAIFGFLPISGTLFSYYKIVS SILRVSSSGGSYKAFATCGSHLSVVCXYGTGVGGYLSSDVSSSLRKRAVASVMYTVVTP MLNPLIYSLRNRDIKGVLWQPCSRTAAQSHL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 21 | 100 | -100 | SNP | G/T | 1000GP (YRI, YRI) | |
| 21 | 32,621,113 | 32,621,113 | SNP | A/G | 1000GP (CEU) | |
| 21 | 32,621,229 | 32,621,229 | SNP | G/T | 1000GP (CEU) | |
| 21 | 32,621,938 | 32,621,938 | SNP | A/G | 1000GP (CEU) | |
| 21 | 33,993,459 | 33,993,459 | SNP | C/T | rs73194261 (DbSNP) | |
| 21 | 33,993,539 | 33,993,539 | SNP | G/T | rs7278846 (DbSNP) | |
| 21 | 33,993,861 | 33,993,861 | SNP | C/T | rs73361319 (DbSNP) | |
| 21 | 33,994,017 | 33,994,016 | Ins(1) | -/C | rs34664978 (DbSNP) | |
| 21 | 33,994,187 | 33,994,187 | SNP | A/T | rs2006852 (DbSNP) | |
| 21 | 33,994,248 | 33,994,248 | SNP | A/G | rs701729 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 50 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.