OR7E26P Olfactory Receptor
| Gene Symbol | OR7E26P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | hg523, hg674, OR1-51, OR912-109, OR1-72, OR1-73, OR912-95, OR912-108, OR912-110, OR912-46, OR10-1, OR912-111, HsOR10.1.2P, ORL3078 |
| External Ids | HGNC: 8398 GeneBank: AF399375, AF399384, BK004796, NG_002315, U86217-U86219, U86291, U86293 ORDB: ORL3078 |
| Build #39 labels | OR7E68P, OR7E26P |
| Chromosomal location | 10:14,999,103-15,000,085 (-) |
| Cluster | 10@15 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E28P | 91.93% | 322 |
| OR7E36P | 90.74% | 324 |
| OR7E37P | 91.33% | 323 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 71% | 322 |
| Mouse | Or7e177 | 67% | 316 |
| Rat | Or7e173 | 66% | 307 |
| Cow | OR7E186 | 70% | 307 |
| Orang | OR7E15P | 88% | 320 |
| Orang | OR7E14P | 85% | 320 |
| Horse | OR7E225 | 69% | 320 |
| Chimp | OR7E36P | 89% | 323 |
| Chimp | OR7E28P | 88% | 316 |
| Chimp | OR7E33P | 87% | 316 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG220089 |
Sequence information
| Nucleotide sequence |
CCCTCTTTTCTAGGCAAAAGTTGTCCAATCTCTACAGACCCACAGAATCTAACAGATGTC TCTATATTCCTCCTCCTAGAAGCTCAGAGGATCCAGAATGGCAGCCGGTCCTCACTGGGC TGTGCCTGTCCATGTGCCTGGTCACGGTGCTGGGGAACCTGCTCATCATCCTGGCCGTCA GCCCTGACTCCCACCTCCACATCCCCATGTACTTCTTCCTCTCCAACCTGTCCCTGCCTG ACATCGGTTTCACCTCCACCACGGTCCCCAAGATGATTGTGGACATCCAGTCTCACAGCA GAGTCATCTCCTACGCAGGCTGCCTGACTCAGATGTCTCTCTTTGCCATTTTTGGAGGCA TGGAAGAGAGACATGCTCCTGAGTGTGATAGCCTATGAGCGGTTTGTAGCCATCTGTCAC CCTCTATATCATTCAGCCATCATGAACCCATGTTTCTGTGGCTTTCTAGTTTTGTTGTCT TTTTTTTTTCTCAGTCTTTTAGACGCCCAGCTGCACAACTTGATTGCCTTACAAAGGACC TGCTTCAAGGATGTGGAAATTCCTAATTTCTTCTGTGACCCTTCTCAACTCCCCATCTTG CATATTGTGGCACCTTCACCAATAACATAATCATGTATTTCCCTGCCGCCATATTTGGTT TTCTTCCCATCTCGGGGACCCTTTTCTCTTACAATAAAATTGTTTTCTCCATTCTAAGGG TTTCATCATCAGGTGGGAAGTATAAGGCCTTCTCCACCTGTGGGTCTCACCTGTCAGTTG TTTGCTGATTTTATGGAACAGGCATTGGAGGCTACCTCGGTTCAGATGTGTCATCTTCCC CGAGAAAGGCTGCAGTGGCCTCAGTGATGTACACGGTGGTCATCCCCATGCCGAACCCCT TCATCTACAGCCTGAGAAACAGGGATATGAAAAGTGTCCTGCAGCGGCCACATGGCAGCA CGATCTCATCTCAATATCTTCTT |
| Conceptual translation |
PSFLGKSCPISTDPQNLTDVSIFLLLE/SEDPEWQPVLTGLCLSMCLVTVLGNLLIILA VSPDSHLHIPMYFFLSNLSLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLFAIFG GMEE\MLLSVIAYERFVAICHPLYHSAIMNPCFCGFLVLLSFFFLSLLDAQLHNLIALQ RTCFKDVEIPNFFCDPSQL/HLAYCGTFTNNIIMYFPAAIFGFLPISGTLFSYNKIVFS ILRVSSSGGKYKAFSTCGSHLSVVCXYGTGIGGYLGSDVSSSPRKAAVASVMYTVVIPM PNPFIYSLRNRDMKSVLQRPHGSTISSQYLL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 10 | 14,999,125 | 14,999,125 | SNP | G/A | 1000GP (CEU) | |
| 10 | 15,041,266 | 15,041,266 | SNP | C/T | rs7086210 (DbSNP) | |
| 10 | 15,041,392 | 15,041,392 | SNP | C/T | rs10752346 (DbSNP) | |
| 10 | 15,041,405 | 15,041,405 | SNP | C/G | rs7085444 (DbSNP) | |
| 10 | 15,041,605 | 15,041,604 | Ins(1) | -/A | rs72511766 (DbSNP) | |
| 10 | 15,041,606 | 15,041,605 | Ins(1) | -/A | rs35759753 (DbSNP) | |
| 10 | 15,041,861 | 15,041,861 | SNP | A/G | rs7086050 (DbSNP) | |
| 10 | 15,041,908 | 15,041,908 | SNP | A/C | rs6602796 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 80 (Hasin) | |||
| 10 | 14,955,178 | 15,060,883 | CopyNumber | Variation_53139 (DGV) |
| 10 | 14,975,171 | 15,070,615 | CopyNumber | Variation_53843 (DGV) |
| 10 | 14,982,997 | 15,064,838 | CopyNumber | Variation_23238 (DGV) |
| 10 | 14,990,369 | 15,060,883 | CopyNumber | Variation_29584 (DGV), Variation_48486 (DGV), Variation_48487 (DGV) |
| 10 | 15,039,102 | 15,042,184 | Deletion, CopyNumber | #251 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E26P.aApr07-unspliced | main_exon | CDS_partial | chr10 | 14,999,365 | 15,000,012 | - |