OR7E2P Olfactory Receptor
| Gene Symbol | OR7E2P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | hg94, OR11-6, HsOR11.17.2P, ORL3640 |
| External Ids | HGNC: 8402 GeneBank: AF065857, AF399424, NG_002166 ORDB: ORL3640 |
| Build #39 labels | OR7E2P |
| Chromosomal location | 11:86,857,034-86,858,011 (-) |
| Cluster | 11@87 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by STR1 repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E100P | 85.44% | 309 |
| OR7E102P | 83.12% | 314 |
| OR7E111P | 83.17% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 73% | 294 |
| Mouse | Or7e178 | 69% | 295 |
| Rat | Or7e176 | 64% | 300 |
| Cow | OR7E185P | 70% | 293 |
| Orang | OR7E100P | 85% | 297 |
| Orang | OR7E111P | 82% | 297 |
| Orang | OR7E102 | 82% | 295 |
| Horse | OR7E220 | 71% | 295 |
| Chimp | OR7E100P | 85% | 289 |
| Chimp | OR7E111P | 82% | 297 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AW514861 |
| GNF Atlas2 | 215770_at |
Sequence information
| Nucleotide sequence |
CTTGCCTTCTGGATATTAGGAACAATATCCCAGAAGGCGTGTACAACCCCCTGCGATACT GGGAGACAGCCCGTCCTCACTGGGCTCTCCCTGTCCATGTACCTGGTCACGATGCTGAGG AACCTGTTCATCATCCTGGCTGGCAGCTCTGACCCCCACTTCCACACCCCCATGTACTTC TTCCTCTCCAACCTGTCCTGGGCTGACATTGGTTTCACCTCGGCCACAGTTCCCAAGATG ATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTATGCGGGCTGCCTGACACAGATG TCTTTCTTTGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTCTGATGGCCTATGAC CGATTTGTGGCCATCTGCCCATCTGTCACCCCCTGCACTACCGAGTCATCATGAATCCTC ACCTCTGTGTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGC ACAGCTGGATTGTGTTACACAACTCACCTTCTTCAAGAATGTGGAAATCTATAATTTTTT TTCTGTGACCCATCTCAACTTCTCAACCTTGCCTGTTCTGACAGCATCATCAATAACATA TTATGTATTTTAGATATCCCTATATTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCT TACTATAAAATTGTCTCCTCCATTCCAAGAATTCCATCGTCAGATGGGAAGTATAAAGCC TTCTCCACCTGTGGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGAAACAGGCATTGGC GTGTACCTGACTTCAGCTGTGTCATCATCTCCCAGGAATGGAGTGGTGGCATCAGTGATG TACGCTGTGGTCATCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAACAGGGACATT CATAGTGCCCTGTGGAGGCTGCGCAGCAGAACAGTCAAATCTCATGATCTGTTCCATCCT TTCTCTTGTGTGAGTAAG |
| Conceptual translation |
LAFWILGTISQKACTTPCDTGRQPVLTGLSLSMYLVTMLRNLFIILAGSSDPHFHTPMYF FLSNLSWADIGFTSATVPKMIVDMQSHSRVISYAGCLTQMSFFVLFACIEDMLLTLMAYD RFVAIC/ICHPLHYRVIMNPHLCVFLVLVSFFLSLLDSQLHSWIVL/QLTFFKNVEIY NFF/CDPSQLLNLACSDSIINNILCILDIPIFGFLPISGILLSYYKIVSSIPRIPSSDG KYKAFSTCGSHLAVVCLFYETGIGVYLTSAVSSSPRNGVVASVMYAVVIPMLNPFIYSLR NRDIHSALWRLRSRTVKSHDLFHPFSCVSK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 10 (Hasin) | |||
| 11 | 86,566,076 | 86,569,153 | CopyNumber | #82 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.