OR7E46P Olfactory Receptor
| Gene Symbol | OR7E46P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST379, HsOR2.1.2P, ORL3087 |
| External Ids | HGNC: 8420 GeneBank: AF399385, NG_004394 ORDB: ORL3087 |
| Build #39 labels | OR7E46P |
| Chromosomal location | 2:71,037,721-71,038,665 (+) |
| Cluster | 2@71 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E109P | 92.09% | 316 |
| OR7E31P | 90.79% | 315 |
| OR7E33P | 90.51% | 316 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 73% | 304 |
| Mouse | Or7e178 | 68% | 304 |
| Rat | Or7e173 | 64% | 306 |
| Cow | OR7E186 | 72% | 296 |
| Orang | OR7E15P | 88% | 315 |
| Orang | OR7E14P | 88% | 315 |
| Orang | OR7E109P | 90% | 297 |
| Orang | OR7E31DP | 90% | 297 |
| Horse | OR7E225 | 71% | 308 |
| Chimp | OR7E36P | 90% | 318 |
| Chimp | OR7E31P | 90% | 316 |
| Chimp | OR7E26P | 90% | 315 |
| Chimp | OR7E33P | 88% | 316 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BM955917 |
Sequence information
| Nucleotide sequence |
TGTCCAATCTCTACAGACCCACAGAATCTAACAGATGTCTCTATATTCCTCCTCCGAGAA CCTCAGAGGATCCAGAATGGCAGCTGGTCCTTGCTGGGTTGTTCCTGTCCATGTGCCTGG TAACGGTGCTGGGGAACCTGCTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCACA CCCCCATGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCA CGGTAGCCAAGATGATTGTGGACATCCAATCTCACAGCAGAGTCATCTCCTATGCAGGCT GCCTGACTCAGATGTCTCCCTTTGCCATTTTTGGAGGCATGGAAGAGAGACACGCTCCTG AGTGTGATGGCCTCTGACCGCTTTGTAGCCATCTGTCACCCTCTATATCATTCAGCCATC ATGAACCCGTGTTTCTGTGGCTTTCTAGTTTTGTTGTCTTTTTTTTTTTTCTGTCTTTTA GATGCCCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAAGGATGTGGAAATT CCTAATTTCTTCTGTGACCCTTCTCAACTCCCCCATCTTGCATGTTGTGACACCTTCACC AATAACATAATCATGTATTTCCCTGCTGCCATATTTGGTTTTCTTCCCATCTCGGGTTCC CTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAG TATTAGGCCTTCTCCTCCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTATGGAACA GGCGTTGGAGGGTACCTCAGTTGAGATGTGTCATCTTCCCCGAGGAAGGTTGCAGTGGCC TCAGTGATGTACATGGTGGTCACCCCCATGCTGAACCCCTTTGTCTACAGCCTGAGAAAC AGGGATATTAAAAGTGTCCTGCGGTGGCCGCACGGCAGCACGGTC |
| Conceptual translation |
CPISTDPQNLTDVSIFLL/RTSEDPEWQLVLAGLFLSMCLVTVLGNLLIILAVSPDSHL HTPMYFFLSNLSLPDIGFTSTTVAKMIVDIQSHSRVISYAGCLTQMSPFAIFGGMEE\T LLSVMASDRFVAICHPLYHSAIMNPCFCGFLVLLSFFFFCLLDAQLHNLIALQMTCFKDV EIPNFFCDPSQLPHLACCDTFTNNIIMYFPAAIFGFLPISGSLFSYYKIVSSILRVSSSG GKYXFSSCGSHLSVVCXYGTGVGGYLSXVSSSPRKVAVASVMYMVVTPMLNPFVYSL RNRDIKSVLRWPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 2 | 71,038,191 | 71,038,191 | SNP | C/T | 1000GP (CEU) | |
| 2 | 71,038,653 | 71,038,653 | SNP | C/T | 1000GP (CHBJPT) | |
| 2 | 71,264,949 | 71,264,949 | SNP | C/T | rs6718523 (DbSNP) | |
| 2 | 71,265,187 | 71,265,187 | SNP | G/T | rs9309445 (DbSNP) | |
| 2 | 71,265,309 | 71,265,308 | Ins(2) | -/TT | rs71400975 (DbSNP) | |
| 2 | 71,265,321 | 71,265,320 | Ins(3) | -/TTT | rs61567652 (DbSNP) | |
| 2 | 71,265,641 | 71,265,641 | SNP | A/G | rs13011403 (DbSNP) | |
| 2 | 71,265,717 | 71,265,717 | SNP | C/T | rs35915661 (DbSNP) | |
| 2 | 71,265,755 | 71,265,754 | Ins(1) | -/T | rs34216457 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 64 (Hasin) | |||
| 2 | 71,215,632 | 71,272,144 | CopyNumber | Variation_73947 (DGV) |
| 2 | 71,263,768 | 71,276,698 | CopyNumber | Variation_9941 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E46P.aApr07-unspliced | main_exon | 5UTR | chr2 | 71,037,716 | 71,037,721 | + |
| CDS_partial | chr2 | 71,037,721 | 71,038,574 | + | ||