OR7E4P Olfactory Receptor
| Gene Symbol | OR7E4P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-11a, OR11-262, HsOR11.15.2P, ORL3479 |
| External Ids | HGNC: 8424 GeneBank: AB065524, AF065864, AF399418, BK004804, NG_002162 ORDB: ORL3479 |
| Build #39 labels | OR7E4P |
| Chromosomal location | 11:71,620,013-71,621,032 (+) |
| Cluster | 11@71 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E108P | 89.71% | 340 |
| OR7E129P | 90.35% | 342 |
| OR7E91P | 88.82% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 69% | 329 |
| Mouse | Or7e178 | 66% | 308 |
| Rat | Or7e173 | 61% | 308 |
| Cow | OR7E186 | 66% | 327 |
| Orang | OR7E103P | 89% | 307 |
| Orang | OR7E111P | 89% | 297 |
| Horse | OR7E225 | 68% | 322 |
| Chimp | OR7E115P | 88% | 318 |
| Chimp | OR7E111P | 91% | 297 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTTCTTCCCAAGGTGTCCAAGTCACACA GAGCCACAGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCCATCCTGGCTGGTCTGTCCCTGTCCATGTATCTGGTCACGGTGCTGAGG AACCTGCTCATCATCCTGGCTGTCAGCTCTGACCCCCACCTCCACACCCCCATGTGCTTC TTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTTGGCCACGGTTCCTAAGATG ATTGTGGACATGCAGTCTCATACCAGAGTCATCTCTTATGAGGGCTGCCTGACACGGATA TCTTTCTTGGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTGTGATGGCCTATGAC TGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCACCTCTGT GTCTTCTTCCTTTTGGTATACTTTTTCCTTAGCTTGTTGGATTCCCAGCTGCACAGTTGG ATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTTTGTCTGTGACCCC TCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATGTATTTC CATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTATAAAATC GTCCCCTCCATTCTAAGGATTTCATCATCAGATGGGAAGTATAAAGCCTTCTCCACCTGT GGCTCTCACTTGGCAGTTGTTTGCTGATTTTATGGAACAGGCATTGGCGTGTACCTGACT TCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTAGCGTCAGTGATGTACGCTGTGGTC ACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGTGCCCTG CGGAGGCTGCTCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
LVFIFYFSNPLFFPRCPSHTEPQNLTGVXFLLLGLSEDPELQPILAGLSLSMYLVTVLR NLLIILAVSSDPHLHTPMCFFLSNLCWADIGFTLATVPKMIVDMQSHTRVISYEGCLTRI SFLVLFACIEDMLLTVMAYDCFVAICRPLHYPVIVNPHLCVFFLLVYFFLSLLDSQLHSW IVLQFTIIKNVEISNFVCDPSQLLKLACSDSVINSIFMYFHSTMFGFLPISGILLSYYKI VPSILRISSSDGKYKAFSTCGSHLAVVCXYGTGIGVYLTSAVSPPPRNGVVASVMYAVV TPMLNLFIYSLRNRDIQSALRRLLSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 71,331,879 | 71,331,879 | SNP | A/G | rs59191949 (DbSNP) | |
| 11 | 71,331,161 | 71,331,161 | SNP | A/G | rs58779573 (DbSNP) | |
| 11 | 71,331,913 | 71,331,913 | SNP | A/G | rs58287200 (DbSNP) | |
| 11 | 71,331,126 | 71,331,126 | SNP | A/G | rs11234337 (DbSNP) | |
| 11 | 71,331,855 | 71,331,855 | SNP | A/T | rs72491185 (DbSNP) | |
| 11 | 71,331,735 | 71,331,735 | SNP | C/G | rs72488962 (DbSNP) | |
| 11 | 71,331,999 | 71,331,999 | SNP | C/G | rs56406974 (DbSNP) | |
| 11 | 71,331,902 | 71,331,902 | SNP | C/G | rs56289174 (DbSNP) | |
| 11 | 71,331,339 | 71,331,339 | SNP | C/T | rs61888859 (DbSNP) | |
| 11 | 71,331,457 | 71,331,457 | SNP | C/T | rs61890060 (DbSNP) | |
| 11 | 71,331,286 | 71,331,286 | SNP | C/T | rs61888858 (DbSNP) | |
| 11 | 71,331,202 | 71,331,202 | SNP | G/T | rs61888857 (DbSNP) | |
| 11 | 71,620,226 | 71,620,226 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 71,620,330 | 71,620,330 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 11 | 71,620,335 | 71,620,335 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 11 | 71,620,367 | 71,620,367 | SNP | C/A | 1000GP (CEU) | |
| 11 | 71,620,372 | 71,620,372 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 71,292,416 | 71,508,962 | CopyNumber | Variation_75697 (DGV) |
| 11 | 71,292,416 | 71,613,954 | CopyNumber | Variation_85847 (DGV) |
| 11 | 71,292,416 | 71,502,421 | CopyNumber | Variation_85848 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.