Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E55P Olfactory Receptor

Gene Symbol OR7E55P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases OR2DG, OST013, OR3.2, HsOR3.2.3P, ORL3096
External Ids HGNC: 8430   GeneBank: NG_004370   ORDB: ORL3096   
Build #39 labels OR7E55P, OR7E56P
Chromosomal location 3:75,370,413-75,371,363 (-)
Cluster 3@75
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E148P 88.33% 317
OR7E59P 88.44% 320
OR7E84P 88.44% 320

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E153 70% 308
Mouse Or7e178 65% 314
Rat Or7e173 63% 309
Cow OR7E186 70% 300
Orang OR7E14P 85% 317
Orang OR7E12P 84% 314
Orang OR7E53P 83% 314
Horse OR7E220 68% 313
Chimp OR7E36P 87% 315
Chimp OR7E14P 86% 317
Chimp OR7E59P 85% 317

Sequence information

Nucleotide sequence AACGATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCGAACTCTCA
GAGGATCCAGAACTGCAGCCGGTCCTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACG
GTGCTCAGGAACCTGCTCATCATCCTGGCCATCAGCCCTGACTCCCACCTCCACACCCCC
ATGTACTTCTTCCTCTCCAACCTGTCCTTTCCTGACATCGGTTTCACCTCCACCACAGTC
CCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTG
ACTCAGATGTCTCTCTTTGCCATTTTTGGAGACATGGAAGAGAGACATGTTCCTGAGTGT
GGTGGCCTATGACCGGTTTGTAGCCATCTGTCACCCTCTATATCGTTCAGCCATCTTAAA
CCCCTGTTTCTGTGGCTTCCTAGATTCGTTGTCCTTGTTTTTTTTTTTTTTTTTTCTCAG
TCTTTTAGACTCCCAGCTGCACAACTTGATTGCCTTACAAACGACCTGCTTCAAGGATGT
GGAAATTCCTAATTTCTTCTGGGAACCTTCTCAACTCCCCCATCTTGCATGTTGTGACAT
CTTCACCAGGAACATCAACCTGTATTTCCCTGCTGCCATATTTGGTTTTCTTCCCATCTC
GGGGACGCTTTTCTCTTACTATAAAATTGTTTCCTTCATTCTGAGGGTTTCATCATCAGG
TGGGAAGTATAAACCTTCTCCGCCTGTGGGTCTCATCTGTCAGTTGTTTACTGATTTTAT
GGAACAGGCTTTGGAGGGTACCTCAGTTCAGATGTGTCATCTTCCCCGAGAAAGGGTGCA
GTGGCCTCAGTGATGTACACGGTGGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTG
AGAAACGGGGATATTAAAAGTGTCCTGCGGCAGCCGCACGGCAGCACAGTC
Conceptual translation NDTDPQSLTDVSIFLLLELSEDPELQPVLAGLFLSMCLVTVLRNLLIILAISPDSHLHTP
MYFFLSNLSFPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLFAIFGDMEE\MFLS
VVAYDRFVAICHPLYRSAILNPCFCGFL\RCP/FFFFFFLSLLDSQLHNLIALQTTCF
KDVEIPNFFWEPSQLPHLACCDIFTRNINLYFPAAIFGFLPISGTLFSYYKIVSFILRVS
SSGGKYK/FSACGSHLSVVYXYGTGFGGYLSSDVSSSPRKGAVASVMYTVVTPMLNPF
IYSLRNGDIKSVLRQPHGSTV

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
3 75,420,058 75,420,057 Ins(1) -/A rs55912815 (DbSNP)
3 75,420,040 75,420,039 Ins(1) -/A rs34802034 (DbSNP)
3 75,419,687 75,419,687 SNP A/C/G rs1054460 (DbSNP)
3 75,420,180 75,420,180 SNP A/G rs62259093 (DbSNP)
3 75,420,117 75,420,117 SNP A/G rs9713678 (DbSNP)
3 75,420,157 75,420,157 SNP A/G rs72899080 (DbSNP)
3 75,419,993 75,419,993 SNP A/G rs9713670 (DbSNP)
3 75,419,666 75,419,666 SNP A/T rs72496269 (DbSNP)
3 75,419,740 75,419,740 SNP C/A rs2091865 (DbSNP)
3 75,419,736 75,419,736 SNP T/G rs2091866 (DbSNP)
3 75,370,585 75,370,585 SNP T/G 1000GP (CEU)
3 75,370,589 75,370,589 SNP A/C 1000GP (CEU, CHBJPT)
3 75,371,006 75,371,006 SNP A/G 1000GP (CEU)
3 75,371,029 75,371,029 SNP A/G 1000GP (CEU)
3 100 -100 SNP T/G 1000GP (YRI, YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
3 75,392,078 76,003,036 CopyNumber Variation_2462 (DGV)
3 75,346,159 75,619,247 CopyNumber Variation_3433 (DGV)
3 75,244,279 75,595,933 CopyNumber Variation_5366 (DGV)
3 75,250,088 75,853,296 CopyNumber Variation_5367 (DGV)
3 75,392,373 75,776,083 CopyNumber Variation_8986 (DGV)
3 75,392,078 75,639,910 CopyNumber Variation_8987 (DGV)
3 75,392,373 75,676,582 CopyNumber Variation_34587 (DGV)
3 75,379,085 75,428,675 CopyNumber Variation_51163 (DGV)
3 75,382,434 75,506,050 CopyNumber Variation_51164 (DGV)
3 75,382,434 75,568,219 CopyNumber Variation_51165 (DGV)
3 75,391,759 75,568,219 CopyNumber Variation_51166 (DGV)
3 75,388,161 75,568,219 CopyNumber Variation_53840 (DGV)
3 75,381,808 75,700,055 CopyNumber Variation_63499 (DGV)
3 75,417,564 75,420,614 Deletion #264 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.