OR7E7P Olfactory Receptor
| Gene Symbol | OR7E7P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | AC004967-A, HsOR7.3.1P, ORL3185 |
| External Ids | HGNC: 8457 GeneBank: NG_002208 ORDB: ORL3185 |
| Build #39 labels | OR7E7P |
| Chromosomal location | 7:97,946,983-97,947,989 (-) |
| Cluster | 7@98 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E117P | 91.23% | 342 |
| OR7E87P | 90.29% | 340 |
| OR7E99P | 90.35% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 331 |
| Mouse | Or7e178 | 62% | 310 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 64% | 329 |
| Orang | OR7E103P | 87% | 307 |
| Orang | OR7E163P | 87% | 298 |
| Orang | OR7E103BP | 85% | 301 |
| Horse | OR7E225 | 65% | 318 |
| Chimp | OR7E163P | 87% | 319 |
| Chimp | OR7E161P | 86% | 319 |
| Chimp | OR7E115P | 84% | 319 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DB558999 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACAGAATCTCACAGATGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCGGTCCTCGCTTTGCTCTCCCTGTCCCTGTCCATGTATCTGGTCATGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGTCTCTCCCCTCCACACCCCCACC TGTGCTGGGCTGACATCGGTTTCACCTTGGCCACGGTTCCCAAGATGATTGTGGACATGC AGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGTCTGACGCAGATGTCTTTCTTCATCC TTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCCTATGACTGCTTTGTAGCCA TCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCACCTCTGTGTCTTCTTCGTTT TGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACAGTTGAATTGTGTTACAAT TCACCATCATCAAGAATGTGGAAATCTCTCATTTTTTCTGTGACCCCTCTCAACTTCTCA AACTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATATATTTCGATAGTACTATGT TTGGTTTTCTTCCCATTTCAGGGATCCTATGGTCTTACTATAAAATCATCCCCTCCATTC TAAGGATTTCATCATCATATGGGAAGTATAAAGCCTTCTCCACATGTGCCTCTCACCTAG CAGTTGTTTGCTGATTTTATGTAACAGGCATTGGCATGTACCTGACTTCAGCTGTGTCAC CACCCCCCAGCAATGGTGTAGTGGCGTCAGTGATGTATGCTGCGGTCACTCCCATGCTGA ACCCTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGTGCCCTGCGGAGGGTGCTCA GCAGAACAGTCGAATTTCATGATCTGTTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPQNLTDVXFLLLGLSEDPELQPVLALLSLSLSMYLVMV LRNLLSILAVSSVSPLHTP/LCWADIGFTLATVPKMIVDMQSHSRVISHAGCLTQMSFF ILFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLHSXVL QFTIIKNVEISHFFCDPSQLLKLACSDSVINSIFIYFDSTMFGFLPISGILWSYYKIIPS ILRISSSYGKYKAFSTCASHLAVVCXYVTGIGMYLTSAVSPPPSNGVVASVMYAAVTPM LNPFIYSLRNRDIQSALRRVLSRTVEFHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 7 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI) | |
| 7 | 97,576,354 | 97,576,354 | SNP | A/G | rs62476116 (DbSNP) | |
| 7 | 97,576,773 | 97,576,773 | SNP | A/G | rs34760117 (DbSNP) | |
| 7 | 97,577,065 | 97,577,065 | SNP | C/G | rs73709143 (DbSNP) | |
| 7 | 97,947,134 | 97,947,134 | SNP | C/A | 1000GP (CEU) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 7 | 97,476,284 | 97,648,029 | CopyNumber | Variation_3691 (DGV) |
| 7 | 97,502,248 | 97,578,516 | CopyNumber | Variation_70006 (DGV) |
| 7 | 97,574,295 | 97,577,401 | Deletion | #193 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E7P.aApr07-unspliced | main_exon | CDS_partial | chr7 | 97,947,237 | 97,947,936 | - |