OR7E83P Olfactory Receptor
| Gene Symbol | OR7E83P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR4.2.4P, ORL3118 |
| External Ids | HGNC: 14688 GeneBank: NG_002251 ORDB: ORL3118 |
| Build #39 labels | OR7E134P, OR7E83P |
| Chromosomal location | 4:9,512,869-9,513,893 (+) |
| Cluster | 4@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 90.64% | 342 |
| OR7E87P | 90.88% | 340 |
| OR7E99P | 91.23% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 64% | 331 |
| Mouse | Or7e178 | 61% | 310 |
| Rat | Or7e173 | 58% | 310 |
| Cow | OR7E186 | 62% | 326 |
| Orang | OR7E103P | 90% | 307 |
| Orang | OR7E163P | 89% | 299 |
| Orang | OR7E103BP | 88% | 301 |
| Horse | OR7E225 | 66% | 318 |
| Chimp | OR7E163P | 88% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E163MP | 87% | 320 |
| Chimp | OR7E115P | 86% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG202648 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCGTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACGGAATCTCACAGATGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAACCGGTCCTCGCTTTGCTCTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG ATGAGGAACCTGCTCAGCATCCTGACTGTCAGCTCTGTCTCTCCCCTCCACACCCCCATG TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGGCCACGGTTCCC ACGATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCCCTCATGCGGGCTGCCTGACG CAGATGTATTTCTTGGTCTTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC CTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTTCTTAGCCTGTTGGATTCCCAGCTGCAC AGTTGAATTGTGTTACAATTCAACATCATCAAGAATGTGGAAATCTCTAATTTTGTCTGT GACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATATCATTTTCATA TATTTCGATAGTACTATGTTTGCTTTTCTTCCCATTTCAGGGATCCTATGGCTTACTATA AAATCGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTGTCCA CCTGTGCCTCTCACCTAGCAGTTGTTTGCTGATTTGATGGAACAGGCATTGGCATGTACC TGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCGTCAGTGATGTACGCTG TGGTCACCCCCATGCTGAACCTTTTCATCTATAGCCTGAGAAACAGGAACATACAAAGTG CCCTGCGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCGTTTTTCTT GTGTG |
| Conceptual translation |
LVFIVYFSNPLSFSRCPRHTEPRNLTDVXFLLLGLSEDPELQPVLALLSLSLSMYLVTV MRNLLSILTVSSVSPLHTPMYFFLSNLCWADIGFTSATVPTMIVDMQSHSRVIPHAGCLT QMYFLVFFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLH SXVLQFNIIKNVEISNFVCDPSQLLKLACSDSVINIIFIYFDSTMFAFLPISGIL/AY YKIVPSILRISSSDGKYKALSTCASHLAVVCXDGTGIGMYLTSAVSPPPRNGVVASVMY AVVTPMLNLFIYSLRNRNIQSALRRLRSRTVESHDLFHRFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 9,515,159 | 9,515,158 | Ins(1) | -/C | rs34468422 (DbSNP) | |
| 4 | 9,514,619 | 9,514,618 | Ins(1) | -/G | rs35236357 (DbSNP) | |
| 4 | 9,514,585 | 9,514,584 | Ins(1) | -/G | rs34756375 (DbSNP) | |
| 4 | 9,514,819 | 9,514,819 | SNP | A/C | rs13108939 (DbSNP) | |
| 4 | 9,515,293 | 9,515,293 | SNP | C/G | rs7689849 (DbSNP) | |
| 4 | 9,515,121 | 9,515,121 | SNP | C/T | rs13109658 (DbSNP) | |
| 4 | 9,514,668 | 9,514,668 | SNP | C/T | rs13108672 (DbSNP) | |
| 4 | 9,514,776 | 9,514,776 | SNP | C/T | rs34056993 (DbSNP) | |
| 4 | 9,515,174 | 9,515,174 | SNP | C/T | rs12499381 (DbSNP) | |
| 4 | 9,515,537 | 9,515,537 | SNP | G/T | rs12501954 (DbSNP) | |
| 4 | 9,515,288 | 9,515,288 | SNP | G/T | rs7689839 (DbSNP) | |
| 4 | 9,513,525 | 9,513,525 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 4 | 9,513,569 | 9,513,569 | SNP | G/C | 1000GP (CEU, CHBJPT) | |
| 4 | 9,513,570 | 9,513,570 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 4 | 9,512,881 | 9,512,881 | SNP | G/A | 1000GP (CHBJPT) | |
| 4 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 4 | 8,707,676 | 9,852,717 | InversionBreakpoint | Variation_0347 (DGV) |
| 4 | 9,400,938 | 9,594,059 | CopyNumber | Variation_0699 (DGV), Variation_2069 (DGV) |
| 4 | 8,705,921 | 9,811,805 | CopyNumber | Variation_2497 (DGV) |
| 4 | 8,522,173 | 10,273,779 | CopyNumber | Variation_3479 (DGV) |
| 4 | 9,371,116 | 9,719,981 | CopyNumber | Variation_9470 (DGV) |
| 4 | 9,381,818 | 9,681,651 | CopyNumber | Variation_34433 (DGV) |
| 4 | 9,480,235 | 9,586,764 | CopyNumber | Variation_37604 (DGV) |
| 4 | 9,371,116 | 9,573,740 | CopyNumber | Variation_51486 (DGV) |
| 4 | 9,371,116 | 9,599,790 | CopyNumber | Variation_53853 (DGV) |
| 4 | 9,508,396 | 9,745,703 | CopyNumber | Variation_63744 (DGV), Variation_63745 (DGV) |
| 4 | 9,514,418 | 9,517,542 | Deletion | #265 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.