OR7E84P Olfactory Receptor
| Gene Symbol | OR7E84P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST185, HsOR4.2.2P, ORL3119 |
| External Ids | HGNC: 14690 ORDB: ORL3119 |
| Build #39 labels | OR7E84P, OR7E54P |
| Chromosomal location | 4:9,469,023-9,469,980 (+) |
| Cluster | 4@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E126P | 91.88% | 320 |
| OR7E148P | 90.94% | 320 |
| OR7E59P | 89.38% | 320 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 69% | 311 |
| Mouse | Or7e178 | 63% | 317 |
| Rat | Or7e173 | 62% | 312 |
| Cow | OR7E186 | 68% | 314 |
| Orang | OR7E12P | 85% | 317 |
| Orang | OR7E53P | 85% | 317 |
| Orang | OR7E84BP | 83% | 320 |
| Orang | OR7E14P | 83% | 320 |
| Horse | OR7E225 | 66% | 318 |
| Chimp | OR7E53P | 88% | 320 |
| Chimp | OR7E55P | 88% | 317 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA815433 |
| GNF Atlas2 | gnf1h10282_x_at |
Sequence information
| Nucleotide sequence |
AACGATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCGAACTCTCA GAGGATCCAGAACTGCAGCCGGTCATCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACG GTGCTGGGGAACCTGCTCATCATCATGGCAGTCAGCCCTGACTTCCACCTCCACACCCCC ATGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACACGGTCC CCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTGA CTCAGATGTCTCTCTTTGCCATTTTTGGAGGCATGGAAGAGACACATGCTCCTGAGCGTG ATGGCCTACGACCAGTTTGTAGCCATCTGTCACCCTCCATATCGTTCAGCCATCTTGAAC CCGTGTTTCTGTAGCTTCCAAGATTTGTTGTCCTTGTTTTTTTTCTTTTTTTTTTTCTTT TTTTCCTCAGGCTTTTAGACTCCCAGCTGCATAACTTGATTGCCTTACAAATGACCTGCT TCAAGGATGTGGAAATTTCTAATGTCTTCTGGGAACCTTCTCAACTCCCCCATCTTGCAT GTTGTGACACCTTCACCAGGAACATCAACCTGTATTTCCCTGCTGCCGTATTGGGTTTTC TTCCCATCTCGGGGACGCTTTTCTCTTACTGTAAAATTGTTTCCTCCATTCTGAGGGTTT CATCATCAGGTGGGAAGTATAAACCTTCTCCACCTGTGGGTCTCACCTGTCTGCTGTTTG CTGATTTTATGGAACAGGCGTTGGAGGGTATCTCGGTTCAGATGTGTCATCTTCCCCGAG AAAGAGTGCAGTGGCCTCAGTGATGTATACGGTGGTCACCCCCATGCTGAACCCCTTCAT CTACAGCCTGAGAAACAGGGATATGAAAAGTGTCCTGCGGCGGCCGCACAGCAGCACGGT C |
| Conceptual translation |
NDTDPQSLTDVSIFLLLELSEDPELQPVIAGLFLSMCLVTVLGNLLIIMAVSPDFHLHTP MYFFLSNLSLPDIGFTS/TVPKMIVDIQSHSRVISYAGCLTQMSLFAIFGGMEE\MLL SVMAYDQFVAICHPPYRSAILNPCFCSFQ\CCPCFFSFFF\FFLRLLDSQLHNLIALQ MTCFKDVEISNVFWEPSQLPHLACCDTFTRNINLYFPAAVLGFLPISGTLFSYCKIVSSI LRVSSSGGKYK/FSTCGSHLSAVCXYGTGVGGYLGSDVSSSPRKSAVASVMYTVVTPM LNPFIYSLRNRDMKSVLRRPHSSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 9,471,181 | 9,471,181 | SNP | A/G | rs13435825 (DbSNP) | |
| 4 | 9,470,876 | 9,470,876 | SNP | A/G | rs6823649 (DbSNP) | |
| 4 | 9,470,880 | 9,470,880 | SNP | C/A | rs4974836 (DbSNP) | |
| 4 | 9,471,091 | 9,471,091 | SNP | C/G | rs13435676 (DbSNP) | |
| 4 | 9,471,399 | 9,471,399 | SNP | C/T | rs73100120 (DbSNP) | |
| 4 | 9,471,213 | 9,471,213 | SNP | T/C | rs4974903 (DbSNP) | |
| 4 | 9,471,214 | 9,471,214 | SNP | T/C | rs4974902 (DbSNP) | |
| 4 | 9,471,225 | 9,471,225 | SNP | T/C | rs4974901 (DbSNP) | |
| 4 | 100 | -100 | SNP | T/C | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 4 | 8,707,676 | 9,852,717 | InversionBreakpoint | Variation_0347 (DGV) |
| 4 | 9,400,938 | 9,594,059 | CopyNumber | Variation_0699 (DGV), Variation_2069 (DGV) |
| 4 | 8,705,921 | 9,811,805 | CopyNumber | Variation_2497 (DGV) |
| 4 | 8,522,173 | 10,273,779 | CopyNumber | Variation_3479 (DGV) |
| 4 | 9,370,309 | 9,479,149 | CopyNumber | Variation_4378 (DGV) |
| 4 | 9,371,116 | 9,513,465 | CopyNumber | Variation_9469 (DGV), Variation_51485 (DGV), Variation_53971 (DGV) |
| 4 | 9,371,116 | 9,719,981 | CopyNumber | Variation_9470 (DGV) |
| 4 | 9,471,387 | 9,476,570 | CopyNumber | Variation_31162 (DGV) |
| 4 | 9,381,818 | 9,681,651 | CopyNumber | Variation_34433 (DGV) |
| 4 | 9,438,587 | 9,485,225 | CopyNumber | Variation_36313 (DGV) |
| 4 | 9,442,659 | 9,497,345 | CopyNumber | Variation_36314 (DGV) |
| 4 | 9,442,758 | 9,488,227 | CopyNumber | Variation_36315 (DGV) |
| 4 | 9,449,613 | 9,499,818 | CopyNumber | Variation_36316 (DGV) |
| 4 | 9,461,230 | 9,479,345 | CopyNumber | Variation_38824 (DGV) |
| 4 | 9,371,116 | 9,573,740 | CopyNumber | Variation_51486 (DGV) |
| 4 | 9,379,592 | 9,513,465 | CopyNumber | Variation_51488 (DGV) |
| 4 | 9,371,116 | 9,599,790 | CopyNumber | Variation_53853 (DGV) |
| 4 | 9,371,116 | 9,486,579 | CopyNumber | Variation_59613 (DGV) |
| 4 | 9,324,682 | 9,496,122 | CopyNumber | Variation_68668 (DGV) |
| 4 | 9,453,202 | 9,479,541 | CopyNumber | Variation_68671 (DGV) |
| 4 | 8,732,308 | 9,471,295 | CopyNumber | Variation_80181 (DGV), Variation_91924 (DGV) |
| CopyNumber | 45 (Hasin) | |||
| 4 | 9,470,649 | 9,473,709 | Deletion | #5 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.