OR7E86P Olfactory Receptor
| Gene Symbol | OR7E86P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR4.2.1P, ORL3121 |
| External Ids | HGNC: 14694 GeneBank: NG_002248, XM_497957 ORDB: ORL3121 |
| Build #39 labels | OR7E86P |
| Chromosomal location | 4:9,459,222-9,460,244 (+) |
| Cluster | 4@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| 90.62% | 341 | |
| OR7E129P | 91.79% | 341 |
| OR7E99P | 91.79% | 341 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 330 |
| Mouse | Or7e178 | 63% | 308 |
| Rat | Or7e173 | 61% | 310 |
| Cow | OR7E186 | 65% | 329 |
| Orang | OR7E103P | 90% | 307 |
| Orang | OR7E163P | 90% | 299 |
| Orang | OR7E103BP | 88% | 301 |
| Horse | OR7E225 | 67% | 318 |
| Chimp | OR7E163JP | 91% | 316 |
| Chimp | OR7E163MP | 90% | 320 |
| Chimp | OR7E163CP | 90% | 318 |
| Chimp | OR7E163TP | 93% | 299 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA219029 |
Sequence information
| Nucleotide sequence |
GTTTTTATCTTTTCTTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCAAAGACACACAGGG CCACGGAATCTCACAGATGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCAGAA CTGCAGCCACTCCTCACTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCACGGTGCTG AGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCATGTAC TTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTAGGCCACAGTCCCCAAG ATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGTCTGCCTGATACAG ATGTCTTTATTAGTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCCTAT GACTGCTTTGTAGCCATCTGTTGCCCTCTGCACTACCCAGTCATCGTGAATCCTCACCTC TGTGTCTTCTTCGTTTTGGTGTCCTTTCTCCTTAGCTTGTTGGATTCCCAGCTGCACAGT TGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTCTGTCTGTGAC CCCTCTCATCTTCTCAAACTTGCTTGTTCTGACACCGTCATCAATAGCATATTCATATAT TTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTATGGTCTTACTATAAA ATCGTCCCCTCCATTCTCAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCCACC TGTGCCTCTCACCTAGCAGTTGTTTGCTGATTTTATGGAACAGGCATTGGCATGTACCTG ACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCGTCAGTGATGTACGCTGTG GTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGTGCC CTGCGGAGGCTACGCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCGTTTTTCTTGT GTG |
| Conceptual translation |
VFIFSFSNPLSFSRCQRHTGPRNLTDVXFLLLGLSEDPELQPLLTLLSLSLSMYLVTVL RNLLSILAVSSDSPLHTPMYFFLSNLCWADIGFTXTVPKMIVDMQSHSRVISHAVCLIQ MSLLVLFACIEGMLLTVMAYDCFVAICCPLHYPVIVNPHLCVFFVLVSFLLSLLDSQLHS WIVLQFTIIKNVEISNSVCDPSHLLKLACSDTVINSIFIYFDSTMFGFLPISGILWSYYK IVPSILRISSSDGKYKAFSTCASHLAVVCXYGTGIGMYLTSAVSPPPRNGVVASVMYAV VTPMLNLFIYSLRNRDIQSALRRLRSRTVESHDLFHRFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 9,461,170 | 9,461,170 | In-Del(1) | -/C | rs72580075 (DbSNP) | |
| 4 | 9,461,661 | 9,461,661 | SNP | A/C | rs72488963 (DbSNP) | |
| 4 | 9,461,697 | 9,461,697 | SNP | G/T | rs72488959 (DbSNP) | |
| 4 | 9,461,716 | 9,461,716 | SNP | G/T | rs73100113 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 4 | 8,522,173 | 10,273,779 | CopyNumber | Variation_3479 (DGV) |
| 4 | 8,705,921 | 9,811,805 | CopyNumber | Variation_2497 (DGV) |
| 4 | 8,707,676 | 9,852,717 | InversionBreakpoint | Variation_0347 (DGV) |
| 4 | 8,732,308 | 9,471,295 | CopyNumber | Variation_80181 (DGV), Variation_91924 (DGV) |
| 4 | 9,324,682 | 9,496,122 | CopyNumber | Variation_68668 (DGV) |
| 4 | 9,370,309 | 9,479,149 | CopyNumber | Variation_4378 (DGV) |
| 4 | 9,371,116 | 9,486,579 | CopyNumber | Variation_59613 (DGV) |
| 4 | 9,371,116 | 9,513,465 | CopyNumber | Variation_9469 (DGV), Variation_51485 (DGV), Variation_53971 (DGV) |
| 4 | 9,371,116 | 9,573,740 | CopyNumber | Variation_51486 (DGV) |
| 4 | 9,371,116 | 9,599,790 | CopyNumber | Variation_53853 (DGV) |
| 4 | 9,371,116 | 9,719,981 | CopyNumber | Variation_9470 (DGV) |
| 4 | 9,379,592 | 9,513,465 | CopyNumber | Variation_51488 (DGV) |
| 4 | 9,381,818 | 9,681,651 | CopyNumber | Variation_34433 (DGV) |
| 4 | 9,400,938 | 9,594,059 | CopyNumber | Variation_0699 (DGV), Variation_2069 (DGV) |
| 4 | 9,438,587 | 9,485,225 | CopyNumber | Variation_36313 (DGV) |
| 4 | 9,442,659 | 9,497,345 | CopyNumber | Variation_36314 (DGV) |
| 4 | 9,442,758 | 9,488,227 | CopyNumber | Variation_36315 (DGV) |
| 4 | 9,449,613 | 9,499,818 | CopyNumber | Variation_36316 (DGV) |
| 4 | 9,453,202 | 9,479,541 | CopyNumber | Variation_68671 (DGV) |
| 4 | 9,460,848 | 9,463,970 | Deletion, CopyNumber | #22 (Waszak) |
| 4 | 9,461,230 | 9,479,345 | CopyNumber | Variation_38824 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.