OR7E87P Olfactory Receptor
| Gene Symbol | OR7E87P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-261, OR11-9, HsOR11.15.1P, ORL3478 |
| External Ids | HGNC: 14709 GeneBank: BK004803 ORDB: ORL3478 |
| Build #39 labels | OR7E87P, OR7E3P |
| Chromosomal location | 11:71,593,394-71,594,413 (+) |
| Cluster | 11@71 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 92.35% | 340 |
| OR7E1P | 92.35% | 340 |
| OR7E99P | 92.65% | 340 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 67% | 331 |
| Mouse | Or7e178 | 65% | 310 |
| Rat | Or7e173 | 61% | 310 |
| Cow | OR7E186 | 65% | 329 |
| Orang | OR7E103P | 90% | 307 |
| Orang | OR7E163P | 89% | 299 |
| Horse | OR7E225 | 68% | 318 |
| Chimp | OR7E163P | 88% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E115P | 87% | 320 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTTGGACTCCCAGAGGATCCA GAACTGCAGCCGGTTCTCGCTTTGCTCTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG CTGAGGAACCTGCTCATCATCCTGGCTGTCAGCTCTGTCTCTCCCCTCCACACCCCCATG TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGGCCACGGTTCCC AAGATGATTGTGGACATGCAGTCGCATAGCAGAGCCATCTCTCATGCGGGCTGTCTGACG CAGATGTCTTTCTTGTTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC TTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCAC AGTTGGATTGTGTTACAATTCACCATCTTCAAGAATGTGGAAATCTCTAATTTTGTCTGT GACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACGGCGTCATCAATAGCATATTCATA TATTTTGATAGTACTATGTTTGGTTTCCTTCCCATTTCAGGGATCCTATGGTCTTACTAT AAAATCGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCC ACCTGTGGCTCTCACCAGGCAGTTGTTTGCTGATTTTATAGAACAGGCATTGGCATGTAC CTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCATCATTGATATACGCT GTTGTCACTCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGCGGAGGCTGCTCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTTTTCT |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLPEDPELQPVLALLSLSLSMYLVTV LRNLLIILAVSSVSPLHTPMYFFLSNLCWADIGFTSATVPKMIVDMQSHSRAISHAGCLT QMSFLFLFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHFCVFFVLVSFFLSLLDSQLH SWIVLQFTIFKNVEISNFVCDPSQLLKLACSDGVINSIFIYFDSTMFGFLPISGILWSYY KIVPSILRISSSDGKYKAFSTCGSHQAVVCXYRTGIGMYLTSAVSPPPRNGVVASLIYA VVTPMLNLFIYSLRNRDIQSALRRLLSRTVESHDLFHPFS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 71,304,934 | 71,304,936 | Del(3) | -/CGT | rs71049996 (DbSNP) | |
| 11 | 71,304,933 | 71,304,935 | Del(3) | -/TCG | rs36047994 (DbSNP) | |
| 11 | 71,303,130 | 71,303,130 | large insertion | 25143bp insertion | rs72492773 (DbSNP) | |
| 11 | 71,305,259 | 71,305,259 | large insertion | 8399bp insertion | rs72495007 (DbSNP) | |
| 11 | 71,305,076 | 71,305,076 | SNP | A/G | rs9735099 (DbSNP) | |
| 11 | 71,305,259 | 71,305,259 | SNP | A/G | rs9734263 (DbSNP) | |
| 11 | 71,305,236 | 71,305,236 | SNP | A/T | rs9734262 (DbSNP) | |
| 11 | 71,304,774 | 71,304,774 | SNP | C/T | rs2096802 (DbSNP) | |
| 11 | 71,304,506 | 71,304,506 | SNP | C/T | rs9667451 (DbSNP) | |
| 11 | 71,305,194 | 71,305,194 | SNP | C/T | rs59931859 (DbSNP) | |
| 11 | 71,594,030 | 71,594,030 | SNP | G/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | G/T | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 71,292,416 | 71,508,962 | CopyNumber | Variation_75697 (DGV) |
| 11 | 71,292,416 | 71,613,954 | CopyNumber | Variation_85847 (DGV) |
| 11 | 71,292,416 | 71,502,421 | CopyNumber | Variation_85848 (DGV) |
| 11 | 71,304,340 | 71,307,459 | Deletion | #305 (Waszak) |
| 11 | 71,305,323 | 71,305,543 | Del(-9) | #17(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.