OR7E89P Olfactory Receptor
| Gene Symbol | OR7E89P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR2.3.1P, ORL3083 |
| External Ids | HGNC: 14730 GeneBank: AF399404, NG_002272 ORDB: ORL3083 |
| Build #39 labels | OR7E89P |
| Chromosomal location | 2:158,853,550-158,854,573 (+) |
| Cluster | 2@160 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| 90.35% | 342 | |
| OR7E129P | 91.52% | 342 |
| OR7E99P | 90.94% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 331 |
| Mouse | Or7e178 | 63% | 310 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 65% | 329 |
| Orang | OR7E103P | 90% | 307 |
| Orang | OR7E103BP | 88% | 301 |
| Orang | OR7E163P | 89% | 299 |
| Horse | OR7E225 | 68% | 318 |
| Chimp | OR7E163P | 89% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E115P | 87% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DA417123 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACG GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCTGCCGGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCATGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCCTCCACACCCCCGTGTA CTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGCCCACGGTTCCCAA GATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGCCTGGCACA GATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTGTGATGGCCTA TGACAGCTTTGTAGCCATCTGTCACCCTCTGCACTACCCAGTCATCATGAATCCTCACCT CTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACGG TTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTTTCTCTGTGA CCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCACCAATAGCATATTCATATA TTTTGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTAGTATAA AATTGTCCCCTCCATTCTAAGGATGTCATCGTCAGATGGGAAGTATAAAGCCTTCACCAC CTGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTGATGGAACAGGCATTGGCATGTACCT GACTTCAGCTCTGTCACCACCCCCCAGGAATGGTGTGGCGGCGTCAGTGATGTACGCTGT GGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGTGC CCTGCGGAGGCTGCGCAGCAGAACAGTGGAATCTCATGATCTGTTCCATCCTTTTTCTTG TGTG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLSEDPELLPVLALLSLSLSMYLVMV LRNLLSILAVSSD\LHTPVYFFLSNLCWADIGFTSPTVPKMIVDMQSHSRVISHAGCLA QMSFLVLFACIEDMLLTVMAYDSFVAICHPLHYPVIMNPHLCVFFVLVSFFLSLLDSQLH GWIVLQFTIIKNVEISNFLCDPSQLLKLACSDSVTNSIFIYFDSTMFGFLPISGILLSX KIVPSILRMSSSDGKYKAFTTCGSHLAVVCXDGTGIGMYLTSALSPPPRNGVAASVMYA VVTPMLNLFIYSLRNRDIQSALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 2 | 159,710,769 | 159,710,769 | Del(1) | -/T | rs35104871 (DbSNP) | |
| 2 | 159,710,850 | 159,710,849 | Ins(1) | -/A | rs36061318 (DbSNP) | |
| 2 | 159,711,009 | 159,711,008 | Ins(1) | -/G | rs35767644 (DbSNP) | |
| 2 | 159,710,981 | 159,710,981 | SNP | A/C | rs59737258 (DbSNP) | |
| 2 | 159,710,189 | 159,710,189 | SNP | A/T | rs9750235 (DbSNP) | |
| 2 | 158,853,677 | 158,853,677 | SNP | T/A | 1000GP (CEU) | |
| 2 | 158,854,400 | 158,854,400 | SNP | C/G | 1000GP (CEU) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 2 | 159,710,696 | 159,730,096 | CopyNumber | Variation_38893 (DGV) |
| 2 | 159,651,734 | 159,953,466 | CopyNumber | Variation_53156 (DGV) |
| 2 | 159,706,274 | 159,747,664 | CopyNumber | Variation_68193 (DGV) |
| 2 | 159,709,962 | 159,713,085 | Deletion | #188 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E89PandOR7E28P.bApr07 | exon_5UTR | chr2 | 158,795,318 | 158,795,430 | + | |
| main_exon | CDS_partial | chr2 | 158,853,594 | 158,853,782 | + | |