OR7E8P Olfactory Receptor
| Gene Symbol | OR7E8P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-11a, pDJ392a17, HsOR8.5.1P, ORL3212 |
| External Ids | HGNC: 8458 GeneBank: AB065485, AF399408, NG_002207 ORDB: ORL3212 |
| Build #39 labels | OR7E8P |
| Chromosomal location | 8:12,684,140-12,685,165 (-) |
| Cluster | 8@13 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 90.94% | 342 |
| OR7E87P | 90.59% | 340 |
| OR7E93P | 90.94% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 66% | 331 |
| Mouse | Or7e178 | 62% | 310 |
| Rat | Or7e173 | 59% | 310 |
| Cow | OR7E186 | 63% | 329 |
| Orang | OR7E103P | 89% | 307 |
| Orang | OR7E163P | 89% | 299 |
| Horse | OR7E225 | 66% | 318 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E163BP | 88% | 320 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGTCGGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCCTGAATCTGGTCACGGTG CTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCATG TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTCTCACCTCGGCCACGGTTCCC AAGGTGATTCTGGATATGCAGTCGCATAGCAGAGTCATCTCTCATGTGGGCTGCCTGACA CAGATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGGCTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATAGTGAATCCTCAC CTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAACCTGTTGGATTCCCAGCTGCAC AGTTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTTTTTCTGT GACCCCTCTCAGCTTCTCAACCTTGCCTGTTCTGACAGCGTCATCAATAGCATATTCATA TATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTAT AAAATTGTCCCCTCCATTCTAAGGATGTCATCGTCAGATGGGAAGTATAAAGCCTTCTCC ACCTATGGCTCTCACCTAGGAGTTGTTTGCTGGTTTTATGGAACAGTCATTGGCATGTAC CTGGCTTCAGCCGTGTCACCACCCCCCAGGAATGGTGTGGTGGCATCAGTGATGTAGGCT GTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGCGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTTTTCT TGTGTG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLSEDPELQSVLALLSLSLSLNLVTV LRNLLSILAVSSDSPLHTPMYFFLSNLCWADIGLTSATVPKVILDMQSHSRVISHVGCLT QMSFLVLFACIEGMLLTVMAYGCFVAICRPLHYPVIVNPHLCVFFVLVSFFLNLLDSQLH SWIVLQFTIIKNVEISNFFCDPSQLLNLACSDSVINSIFIYFDSTMFGFLPISGILLSYY KIVPSILRMSSSDGKYKAFSTYGSHLGVVCWFYGTVIGMYLASAVSPPPRNGVVASVMX VVTPMLNLFIYSLRNRDIQSALRRLRSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 8 | 12,542,346 | 12,542,346 | SNP | A/C | rs7007050 (DbSNP) | |
| 8 | 12,541,856 | 12,541,856 | SNP | A/C | rs28455527 (DbSNP) | |
| 8 | 12,541,753 | 12,541,753 | SNP | A/G | rs470964 (DbSNP) | |
| 8 | 12,542,575 | 12,542,575 | SNP | A/G | rs72496205 (DbSNP) | |
| 8 | 12,542,292 | 12,542,292 | SNP | A/G | rs2078772 (DbSNP) | |
| 8 | 12,541,815 | 12,541,815 | SNP | A/G | rs470968 (DbSNP) | |
| 8 | 12,541,945 | 12,541,945 | SNP | A/G | rs28569221 (DbSNP) | |
| 8 | 12,541,823 | 12,541,823 | SNP | A/G | rs470969 (DbSNP) | |
| 8 | 12,542,582 | 12,542,582 | SNP | A/G | rs72494302 (DbSNP) | |
| 8 | 12,541,654 | 12,541,654 | SNP | C/A | rs72488991 (DbSNP) | |
| 8 | 12,541,692 | 12,541,692 | SNP | C/G | rs72475609 (DbSNP) | |
| 8 | 12,542,130 | 12,542,130 | SNP | C/G | rs55752368 (DbSNP) | |
| 8 | 12,541,796 | 12,541,796 | SNP | C/G | rs470965 (DbSNP) | |
| 8 | 12,541,875 | 12,541,875 | SNP | C/G | rs28410287 (DbSNP) | |
| 8 | 12,541,670 | 12,541,670 | SNP | C/G | rs72501840 (DbSNP) | |
| 8 | 12,542,552 | 12,542,552 | SNP | C/T | rs6981576 (DbSNP) | |
| 8 | 12,541,831 | 12,541,831 | SNP | C/T | rs618164 (DbSNP) | |
| 8 | 12,542,072 | 12,542,072 | SNP | G/T | rs72501843 (DbSNP) | |
| 8 | 12,541,755 | 12,541,755 | SNP | G/T | rs28448268 (DbSNP) | |
| 8 | 12,542,221 | 12,542,221 | SNP | T/G | rs72488961 (DbSNP) | |
| 8 | 12,541,956 | 12,541,956 | SNP | T/G | rs72491192 (DbSNP) | |
| 8 | 12,684,366 | 12,684,366 | SNP | C/G | 1000GP (CEU) | |
| 8 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 8 | 11,845,324 | 12,601,971 | CopyNumber | Variation_2736 (DGV) |
| 8 | 11,741,558 | 12,567,301 | CopyNumber | Variation_3720 (DGV) |
| 8 | 11,904,529 | 12,601,971 | CopyNumber | Variation_8596 (DGV) |
| 8 | 12,220,249 | 12,586,261 | CopyNumber | Variation_8597 (DGV) |
| 8 | 12,001,978 | 12,588,283 | CopyNumber | Variation_34527 (DGV) |
| 8 | 11,698,747 | 12,551,156 | CopyNumber | Variation_52352 (DGV) |
| 8 | 12,155,035 | 12,553,131 | CopyNumber | Variation_70301 (DGV) |
| 8 | 12,231,851 | 12,567,977 | CopyNumber | Variation_95262 (DGV) |
| 8 | 12,451,520 | 12,567,977 | CopyNumber | Variation_95265 (DGV) |
| 8 | 12,539,649 | 12,542,774 | Deletion | #270 (Waszak) |
| 8 | 12,541,685 | 12,541,913 | Del(-18) | #4(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.