OR7E90P Olfactory Receptor
| Gene Symbol | OR7E90P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR2.3.3P, ORL3084 |
| External Ids | HGNC: 14733 GeneBank: AF399410, NG_002271 ORDB: ORL3084 |
| Build #39 labels | OR7E90P, OR7E123P |
| Chromosomal location | 2:158,874,639-158,875,667 (+) |
| Cluster | 2@160 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 88.66% | 344 |
| OR7E89P | 90.7% | 344 |
| OR7E99P | 89.24% | 344 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 65% | 333 |
| Mouse | Or7e178 | 62% | 312 |
| Rat | Or7e173 | 59% | 312 |
| Cow | OR7E186 | 62% | 331 |
| Orang | OR7E103P | 86% | 309 |
| Orang | OR7E103BP | 85% | 303 |
| Horse | OR7E225 | 64% | 320 |
| Chimp | OR7E115P | 87% | 322 |
| Chimp | OR7E163P | 86% | 322 |
| Chimp | OR7E161P | 84% | 322 |
| Chimp | OR7E111P | 87% | 301 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACG GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCGGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTCCATGTATCTGGTC ACGGTGCTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCAACTCCACACC CCCATGTACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGCCCATG GTTCCCAAGATGATCATGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGC CTGACACGGATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTGTG ATGGCCTATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCATGAAT CCTCACCTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAG CTGCACAGTTAGATTGTGTTACAATTCACTTTCTTCAATAATGTGGAAATTGCTAATTTT GTCTATGAGCCATCTCAACTTCTCAACCTTGACTGTTCTGACACCGTCATCAATAGCGTA TTTATATATTTCGATAGTACTGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTGTCTTAG TATAAAATTGTCCCCTCCATTCTAAGGATGTCATCGTCAGATGGGAAGTATAAAGCCTTC GCCACCTGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTGATGGAACAGGCATTGGCATG TACCTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGCGGCGTCAGTGATGTAC GCTGTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATTCAA AGTGCCCTGCAGAGGCTGAGTAGCAGAACAGTGGAATCTCATGATCTGTTCCATCCTTTT TCTTGTGTG |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLSEDPELQPVLALLSLSLSMSMYLV TVLRNLLSILAVSSDSQLHTPMYFFLSNLCWADIGFTSPMVPKMIMDMQSHSRVISHAGC LTRMSFLVLFACIEDMLLTVMAYDCFVAICRPLHYPVIMNPHLCVFFVLVSFFLSLLDSQ LHSXVLQFTFFNNVEIANFVYEPSQLLNLDCSDTVINSVFIYFDS\FGFLPISGI/L SXKIVPSILRMSSSDGKYKAFATCGSHLAVVCXDGTGIGMYLTSAVSPPPRNGVAASV MYAVVTPMLNLFIYSLRNRDIQSALQRLSSRTVESHDLFHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 2 | 159,731,808 | 159,731,808 | SNP | A/G | rs13420835 (DbSNP) | |
| 2 | 159,731,728 | 159,731,728 | SNP | A/G | rs62185466 (DbSNP) | |
| 2 | 159,731,466 | 159,731,466 | SNP | A/G | rs10186922 (DbSNP) | |
| 2 | 159,732,154 | 159,732,154 | SNP | A/T | rs12694985 (DbSNP) | |
| 2 | 159,731,639 | 159,731,639 | SNP | C/G | rs72481756 (DbSNP) | |
| 2 | 159,731,631 | 159,731,631 | SNP | C/G | rs72492971 (DbSNP) | |
| 2 | 159,731,496 | 159,731,496 | SNP | C/T | rs72481755 (DbSNP) | |
| 2 | 159,731,958 | 159,731,958 | SNP | G/T | rs72941918 (DbSNP) | |
| 2 | 158,875,216 | 158,875,216 | SNP | A/G | 1000GP (CEU) | |
| 2 | 158,875,296 | 158,875,296 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 2 | 158,874,954 | 158,874,954 | SNP | A/G | 1000GP (CHBJPT) | |
| 2 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 2 | 159,651,734 | 159,953,466 | CopyNumber | Variation_53156 (DGV) |
| 2 | 159,706,274 | 159,747,664 | CopyNumber | Variation_68193 (DGV) |
| CopyNumber | 217 (Hasin) | |||
| 2 | 159,731,051 | 159,734,179 | Deletion | #189 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.