OR7E93P Olfactory Receptor
| Gene Symbol | OR7E93P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR3.5.3P, ORL3103 |
| External Ids | HGNC: 14780 ORDB: ORL3103 |
| Build #39 labels | OR7E131P, OR7E93P |
| Chromosomal location | 3:125,724,480-125,725,514 (+) |
| Cluster | 3@125 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E129P | 92.11% | 342 |
| OR7E97P | 93.33% | 345 |
| OR7E99P | 92.98% | 342 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 65% | 331 |
| Mouse | Or7e178 | 61% | 310 |
| Rat | Or7e173 | 58% | 310 |
| Cow | OR7E186 | 63% | 329 |
| Orang | OR7E103P | 91% | 307 |
| Orang | OR7E163P | 90% | 299 |
| Orang | OR7E103BP | 88% | 301 |
| Horse | OR7E225 | 66% | 318 |
| Chimp | OR7E163P | 89% | 320 |
| Chimp | OR7E163MP | 88% | 320 |
| Chimp | OR7E161P | 88% | 320 |
| Chimp | OR7E115P | 87% | 320 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA093222 |
Sequence information
| Nucleotide sequence |
CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA GAACTGCAGCCAGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG CTGAGGAACTTGCTGAGCATCCTGGCTGTCCGCTCTGAGTCCCCGCTCCACACAACCATG TACTTCTTCCTCTCCATCCTGTGCTGGGCTGACATCGGTTTCACCTCAGCCACAGTTCCC AAGATGATTGTGGACATGCAGTGGTATAGCAGAGTCATCTCTCATGCGGGCTGCCTGACA CAGATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC TATGACTGCTTTGTAGGCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAT CTCTGTGTCTTCTTTGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCAC AGTTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTTTGTCTGT GACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATAGCATCTTCATA TATTTTGGTAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTACTAT AAAATCGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCC ACCTATGGCTCTCACCTAGCAGTTTTTTGCTGATTTGATGGAACAGGCATTGGCGTGTAC CTGACTTCAGCTGTGGCACCACCCCTCAGGAATGGTGTGGTGGTGTCAGTGATGTAAGCT GTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT GCCCTGCGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTTTTCT GGTGTGGGTGAGAAA |
| Conceptual translation |
LVFIFYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLSEDPELQPVLALLSLSLSMYLVTV LRNLLSILAVRSESPLHTTMYFFLSILCWADIGFTSATVPKMIVDMQWYSRVISHAGCLT QMSFLVLFACIEGMLLTVMAYDCFVGICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLH SWIVLQFTIIKNVEISNFVCDPSQLLKLACSDSVINSIFIYFGSTMFGFLPISGILLSYY KIVPSILRISSSDGKYKAFSTYGSHLAVFCXDGTGIGVYLTSAVAPPLRNGVVVSVMX VVTPMLNLFIYSLRNRDIQSALRRLRSRTVESHDLFHPFSGVGEK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 3 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI) | |
| 3 | 125,443,454 | 125,443,454 | SNP | A/G | rs9289258 (DbSNP) | |
| 3 | 125,443,512 | 125,443,512 | SNP | C/T | rs9289259 (DbSNP) | |
| 3 | 125,443,645 | 125,443,647 | mnp | CAC/GGT | rs35642806 (DbSNP) | |
| 3 | 125,443,736 | 125,443,736 | SNP | A/G | rs62271906 (DbSNP) | |
| 3 | 125,443,848 | 125,443,848 | SNP | A/G | rs9855116 (DbSNP) | |
| 3 | 125,444,125 | 125,444,125 | SNP | A/T | rs9875096 (DbSNP) | |
| 3 | 125,725,282 | 125,725,282 | SNP | T/A | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 3 | 125,399,139 | 125,465,506 | CopyNumber | Variation_68444 (DGV) |
| 3 | 125,416,714 | 125,474,884 | CopyNumber | Variation_91515 (DGV) |
| 3 | 125,416,714 | 125,645,185 | CopyNumber | Variation_91514 (DGV) |
| 3 | 125,443,223 | 125,446,357 | Deletion | #297 (Waszak) |
| 3 | 125,443,608 | 125,458,762 | CopyNumber | Variation_38943 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.