OR7E94P Olfactory Receptor
| Gene Symbol | OR7E94P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR4.4.1P, ORL3123 |
| External Ids | HGNC: 14789 GeneBank: NG_002221 ORDB: ORL3123 |
| Build #39 labels | OR7E94P |
| Chromosomal location | 4:79,587,111-79,588,128 (-) |
| Cluster | 4@81 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E116P | 48.94% | 282 |
| OR7E24 | 70.81% | 161 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 62% | 169 |
| Mouse | Or7e171-ps | 54% | 157 |
| Rat | Or7e166 | 52% | 163 |
| Cow | OR7E193 | 56% | 164 |
| Orang | OR7E24P | 73% | 154 |
| Horse | OR7E226 | 60% | 161 |
| Chimp | OR7E115P | 77% | 134 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG191166 |
| GNF Atlas2 | gnf1h09598_x_at |
Sequence information
| Nucleotide sequence |
TTATTTTTTATTTTTTCCAATCCTCTTTTCTTCTCAAGGTGTCCAAGTCACACAGAACCA CAGAATCTCACAGGTGTCTCAGAATTCCTTCTCCTGGGACTCTCAGAGGATCCAGAACTG CAGCCTGTCCTCGCTTGGCTGTCCTTGTCCATTTACCTGGTCACAGTGCTGGGGAACCTG CTCATCATCCTGGCTGTCAGCTCTGACTCCCACCTCCACACCCCCATATACTTCTTCCTC TTCAACCTGTCCTTGGCTGACATTGGTTTCACCTCGGCCATGGTTCCCAAGATGATTGTG GACATGCAATCGCATAGCAGAGTCATCTCTTATGCGGGCTGCCTGACATAGATGTCTTTC TTTGTCCTTTTTTTTTCAATTATTATTATACTTTAAGTTCTAGGGTACATGTGCACAACG TGCAGGTTTGTTATATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGT CATTTACATTAGGTATATCTTCTAATGTTATCCCTCCCTCCTCCCCCCAGCCCACGACAG GCCCCAGTGTGTGATGTTCCCCATCCTGTGTCCAAGTGTTCTCATTGTTCAATTCCAACC TGTAAGTGAGAACATGCGGTGTTTGGTTTTCTGTCCTTGCAATAGCTTGCTGAGAATGAT GGTTTCCAGCTTCATCCATGTCCCTACAAAGTACATGAACTCATCCCTTTTTATGGCTGC ATAGTATTCCATGGAAGACATGTCTAATGTTTAAAGGTTGTAAATAAGGCAAATAACTCA TAAATAAAACATGTCCTGTTCTCTTATCTTGATACATATACCTTAATAGCAACAAGATCA ATGTATATACAAATGCATATGTATGCATAAAGCTGTGTATTTTTATATGACTGCAAGCCA GTAAAATAACAAGAGAGCTTAATTTAATTATTATTGTGCTTTTCTGAATGTTCTCTTTAG GCCTGCTGTGCTCTAACAGATAATAAAATGAAGATACATAATTCACAAATACATATTT |
| Conceptual translation |
LFFIFSNPLFFSRCPSHTEPQNLTGVSEFLLLGLSEDPELQPVLAWLSLSIYLVTVLGNL LIILAVSSDSHLHTPIYFFLFNLSLADIGFTSAMVPKMIVDMQSHSRVISYAGCLTXSF FVLFFSII/YTLSSRVHVHNVQVCYICIHVPCWCAAPINSSFTLGISSNVIPPSSPQPT TGPSVXSPS/CPSVLIVQFQPVSENMRCLVFCPCNSLLRMMVSSFIHVPTKYMNSSLF MAAXSMEDMSNVXLXRQITHKXMSC/SYLDTYTLIATRSMYIQMHMYA\AVYFY MTASQXNKRAXNYYCAFLNVLFRPAVLXIIKXYIIHKYIF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 80,508,916 | 80,508,915 | Ins(1) | -/A | rs71216270 (DbSNP) | |
| 4 | 80,508,907 | 80,508,906 | Ins(1) | -/A | rs35732335 (DbSNP) | |
| 4 | 80,508,788 | 80,508,788 | SNP | C/T | rs13129838 (DbSNP) | |
| 4 | 80,508,389 | 80,508,389 | SNP | G/T | rs72649314 (DbSNP) | |
| 4 | 79,587,235 | 79,587,235 | SNP | G/T | 1000GP (CHBJPT) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E94P.aApr07-unspliced | main_exon | CDS_partial | chr4 | 79,587,302 | 79,588,090 | - |