OR7H2P Olfactory Receptor
| Gene Symbol | OR7H2P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | H |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR5.1.1P |
| External Ids | HGNC: 31314 GeneBank: NG_004438 |
| Build #39 labels | |
| Chromosomal location | 5:101,815,883-101,816,780 (-) |
| Cluster | 5@101 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A2P | 33.22% | 304 |
| OR7D4 | 36.43% | 258 |
| OR7G3 | 33.71% | 267 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Mouse | Or7d9 | 48% | 135 |
| Rat | Or7d9 | 47% | 135 |
| Orang | OR7V1P | 95% | 102 |
| Chimp | OR7V1P | 98% | 102 |
Sequence information
| Nucleotide sequence |
ATGCAATCAGAACACCTTGCAGAATTTTCAGAATTCCTCATTTTGAGCCTCTCAGGAGAT CCAGAACTGCAGCCCCTTCTTGGGCTGTTTCTGTCCATGAACCTGGTCACAGTGCTTGGA AACCTGCTCATTATCCTGGCCATCAGTTCTGACTCCCACCTCCACAAGCCTATGTACTTC TTACTCTCCAAATTGTCCATGGCTGCCATTTGTTTTGTCTTCACCATGATCCAAAAGATG ATGGTAAACCTCAGGGCACAGAGCAAAGACATCTTTACTCAGCCAAGTGGTAGTCCAATT CCATTCTAAATGTGTAGTCTTATCAGATTTCTTCTAATTTAGCAGAAATCTGTTGTTTTA ATCTTCGAATACTCACTGGTTCTAATTCTCCTATTTGAATCTGAAGATGTAAACTAATTA TTCTTTTGTATGAGCCTTTCAAAATAATTGAAGACAGTTATGTCCTTTTCTTGATAATCA CCATACTTTCTTCACACTAATTGATACACAATTGTTAATAAGTCATGGATTTTCTACTCA AACAACCTTTATTCTATCATCTTATGCTTCTGGTTATGTAACAGTTGACTCTCAATGCTT TATTTATTTTTTAAACATGATGATTACTATTAACCTCTTTGTAAGATTTAAAAATATCTT TATGCACAGTAGTATCTCAATAAATTACAACTATTATTTTAAAAAATAAAATAAAGGTGG TATCTATGAGATATATGAGATGATGTTTGTAAATAAAGTCAGTTTACATGTACATGGTTT TATATGTGATAAATTTACATGTAAAAGGCTGCTGTCCATTTCAAGAACCCTGACATTTTA TTTATTTTCATTATCGCAGTTATCATTGTTATTTTTTCTTGTGTTAAATCAGTTCCTA |
| Conceptual translation |
MQSEHLAEFSEFLILSLSGDPELQPLLGLFLSMNLVTVLGNLLIILAISSDSHLHKPMYF LLSKLSMAAICFVFTMIQKMMVNLRAQSKDIFTQPSGSPIPFXCSLIRFLLIXKSVVL IFEYSLVLI/PIXXCKLIILLYEPFKIIED/LCPFLDNHHTFFTLIDTQLLISHGF STQTTFILSSYASGYVTVDSQCFIYFLNMMITIN\LXLKISLCTVVSQXTTIILKNK IKVVS/EIY\XLXKSVYMYMVLYVINLHVKGCCP/SRTLTFYLFSLSQLSLLFFL VLNQFL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 5 | 101,151,820 | 101,151,820 | SNP | A/G | rs73776653 (DbSNP) | |
| 5 | 101,151,906 | 101,151,906 | SNP | A/G | rs354668 (DbSNP) | |
| 5 | 101,152,145 | 101,152,145 | SNP | A/G | rs354667 (DbSNP) | |
| 5 | 101,816,202 | 101,816,202 | SNP | A/G | 1000GP (CEU) | |
| 5 | 101,816,441 | 101,816,441 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 5 | 101,816,465 | 101,816,465 | SNP | T/G | 1000GP (CEU) | |
| 5 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 5 | 101,149,587 | 101,152,584 | CopyNumber | #38 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.