OR7K1P Olfactory Receptor
| Gene Symbol | OR7K1P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | K |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR14.4.1P, ORL3719 |
| External Ids | HGNC: 15366 GeneBank: NG_004167 ORDB: ORL3719 |
| Build #39 labels | OR7K1P |
| Chromosomal location | 14:25,357,764-25,358,767 (+) |
| Cluster | 14@26 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E13P | 52.43% | 309 |
| OR7E24 | 55.45% | 303 |
| OR7E25P | 55.78% | 303 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E154 | 57% | 315 |
| Mouse | Or7e178 | 55% | 312 |
| Rat | Or7e173 | 50% | 303 |
| Cow | OR7E201 | 57% | 315 |
| Orang | OR7E24P | 56% | 310 |
| Horse | OR7E220 | 58% | 315 |
| Chimp | OR7E25P | 56% | 308 |
Sequence information
| Nucleotide sequence |
ATGGGACCAAAGAATCTAACTCGTGTTTTGGAATTCTTCCTCCTCCACTTCTTAGATGAC TTGGAACTGCAGCCTTTCCTCTTCAGGCTGTCCCTGAACCATGCACCTAGTCACAGTGCT TGCGAACTTGCTCACATCCTTCTGACTGTCAGCTTTGCCCTCACCTCCACAACCCCATGA CTTCAACCTGTCCTTAGCTGACATTGGTTTCACCCCTGCCACAATTTCAAAGATAACTGT AGACCTCCAAACTCACAGCAGAATCATTTTATACATGAGCTGCCTGAAATAGATGTCTTT TAAAATTATTTTTGGATGTTTGCACAATCTACTCATGACTGTGATGGCCTATGACCCATT TGTGGCGACCTGTCATCTCTTGTACTACACAGTGATCAGGAATCCCCACCTCTGTGGCCT CCTGCTTCTGGTCTCTCTCTCTCTTTTTTTTTTTTGATCAGTCTTTTGGAAACCCAGCTG TACAGTTTGATGGTGTCACAAGTTCTCTCATGCAAATGTAGACATTCCTCATTTCTTCTG TGACCCTTCTCAGTTTCTCCACCTTTCCTGTTCTGACACTGCCACCAATAACACATTAAT GCATTTTATTGGTGCCATCTCTGTGGTCCATTCTCAGGGATCCTTTACTGTTATACTCAA ATTATGTTCTCCATACTCATAACCCTATAAAATGTGGGAAGTATAAAGCAAACCTTCTCC ACCCATCGCTCTCACCTGTCAGTTGTTTGCTTATTTTATGGAACAGGCCTTGGAGTATAC CTTAGTTTGGCTGGCTCACCTTCCCCAAGAACAGGTGTGGTGGCCTCAATGGTATATACC ACAGTCACCCTCATGTTGAACCCTGCATTCACAGCCTGAGGAACAGAGACATCAAGAATA CCTGGTGGTGGCTCCTCAGCATAACTGCCTGGTATCAATACCTGTGCTATCCTTTATGGA GTGTGGTTAGAAAAAACAGCAAACTCAAATATCTGGAGCCAGAA |
| Conceptual translation |
MGPKNLTRVLEFFLLHFLDDLELQ\SSSGCPXMHLVTVLANLLTSFXSALP\LHNP M/FNLSLADIGFTPATISKITVDLQTHSRIILYMSCLKXSFKIIFGCLHNLLMTVMAY DPFVATCHLLYYTVIRNPHLCGLLLLVSLSL/FFLISLLETQLYSLMVSQVL/MQ/V DIPHFFCDPSQFLHLSCSDTATNNTLMHFIGAI/CGPFSGILYCYTQIMFSILITLXV GSIKQTFSTHRSHLSVVCLFYGTGLGVYLSLAGSPSPRTGVVASMVYTTVTLMLNP/IH SLRNRDIKNTWWWLLSITAWYQYLCYPLWSVVRKNSKLKYLEPE Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 14 | 25,357,781 | 25,357,781 | SNP | A/T | 1000GP (CEU) | |
| 14 | 25,357,940 | 25,357,940 | SNP | A/G | 1000GP (CEU) | |
| 14 | 25,358,100 | 25,358,100 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 14 | 25,826,992 | 25,826,992 | SNP | A/G | rs60951573 (DbSNP) | |
| 14 | 25,827,149 | 25,827,148 | Ins(1) | -/A | rs5807305 (DbSNP) | |
| 14 | 25,827,150 | 25,827,149 | Ins(1) | -/A | rs5807306 (DbSNP) | |
| 14 | 25,827,151 | 25,827,150 | Ins(1) | -/A | rs35544950 (DbSNP) | |
| 14 | 25,827,306 | 25,827,306 | SNP | A/G | rs1956944 (DbSNP) | |
| 14 | 25,827,360 | 25,827,360 | SNP | A/G | rs17109756 (DbSNP) | |
| 14 | 25,827,414 | 25,827,413 | Ins(6) | -/CTCTCT | rs71121825 (DbSNP) | |
| 14 | 25,827,414 | 25,827,414 | SNP | C/T | rs73606836 (DbSNP) | |
| 14 | 25,827,688 | 25,827,688 | SNP | C/T | rs73606838 (DbSNP) | |
| 14 | 25,827,845 | 25,827,845 | SNP | A/C | rs12431781 (DbSNP) | |
| 14 | 25,827,907 | 25,827,907 | SNP | A/C | rs12435561 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.