OR7K1P Olfactory Receptor
Gene Symbol | OR7K1P1 (View this gene in GeneCards) |
Family | 7 |
Subfamily | K |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | HsOR14.4.1P, ORL3719 |
External Ids | HGNC: 15366 GeneBank: NG_004167 ORDB: ORL3719 |
Build #39 labels | OR7K1P |
Chromosomal location | 14:25,357,764-25,358,767 (+) |
Cluster | 14@26 |
Synteny | CLIC#0 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR7E13P | 52.43% | 309 |
OR7E24 | 55.45% | 303 |
OR7E25P | 55.78% | 303 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR7E154 | 57% | 315 |
Mouse | Or7e178 | 55% | 312 |
Rat | Or7e173 | 50% | 303 |
Cow | OR7E201 | 57% | 315 |
Orang | OR7E24P | 56% | 310 |
Horse | OR7E220 | 58% | 315 |
Chimp | OR7E25P | 56% | 308 |
Sequence information
Nucleotide sequence |
ATGGGACCAAAGAATCTAACTCGTGTTTTGGAATTCTTCCTCCTCCACTTCTTAGATGAC TTGGAACTGCAGCCTTTCCTCTTCAGGCTGTCCCTGAACCATGCACCTAGTCACAGTGCT TGCGAACTTGCTCACATCCTTCTGACTGTCAGCTTTGCCCTCACCTCCACAACCCCATGA CTTCAACCTGTCCTTAGCTGACATTGGTTTCACCCCTGCCACAATTTCAAAGATAACTGT AGACCTCCAAACTCACAGCAGAATCATTTTATACATGAGCTGCCTGAAATAGATGTCTTT TAAAATTATTTTTGGATGTTTGCACAATCTACTCATGACTGTGATGGCCTATGACCCATT TGTGGCGACCTGTCATCTCTTGTACTACACAGTGATCAGGAATCCCCACCTCTGTGGCCT CCTGCTTCTGGTCTCTCTCTCTCTTTTTTTTTTTTGATCAGTCTTTTGGAAACCCAGCTG TACAGTTTGATGGTGTCACAAGTTCTCTCATGCAAATGTAGACATTCCTCATTTCTTCTG TGACCCTTCTCAGTTTCTCCACCTTTCCTGTTCTGACACTGCCACCAATAACACATTAAT GCATTTTATTGGTGCCATCTCTGTGGTCCATTCTCAGGGATCCTTTACTGTTATACTCAA ATTATGTTCTCCATACTCATAACCCTATAAAATGTGGGAAGTATAAAGCAAACCTTCTCC ACCCATCGCTCTCACCTGTCAGTTGTTTGCTTATTTTATGGAACAGGCCTTGGAGTATAC CTTAGTTTGGCTGGCTCACCTTCCCCAAGAACAGGTGTGGTGGCCTCAATGGTATATACC ACAGTCACCCTCATGTTGAACCCTGCATTCACAGCCTGAGGAACAGAGACATCAAGAATA CCTGGTGGTGGCTCCTCAGCATAACTGCCTGGTATCAATACCTGTGCTATCCTTTATGGA GTGTGGTTAGAAAAAACAGCAAACTCAAATATCTGGAGCCAGAA |
Conceptual translation |
MGPKNLTRVLEFFLLHFLDDLELQ\SSSGCPXMHLVTVLANLLTSFXSALP\LHNP M/FNLSLADIGFTPATISKITVDLQTHSRIILYMSCLKXSFKIIFGCLHNLLMTVMAY DPFVATCHLLYYTVIRNPHLCGLLLLVSLSL/FFLISLLETQLYSLMVSQVL/MQ/V DIPHFFCDPSQFLHLSCSDTATNNTLMHFIGAI/CGPFSGILYCYTQIMFSILITLXV GSIKQTFSTHRSHLSVVCLFYGTGLGVYLSLAGSPSPRTGVVASMVYTTVTLMLNP/IH SLRNRDIKNTWWWLLSITAWYQYLCYPLWSVVRKNSKLKYLEPE Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
14 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
14 | 25,357,781 | 25,357,781 | SNP | A/T | 1000GP (CEU) | |
14 | 25,357,940 | 25,357,940 | SNP | A/G | 1000GP (CEU) | |
14 | 25,358,100 | 25,358,100 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
14 | 25,826,992 | 25,826,992 | SNP | A/G | rs60951573 (DbSNP) | |
14 | 25,827,149 | 25,827,148 | Ins(1) | -/A | rs5807305 (DbSNP) | |
14 | 25,827,150 | 25,827,149 | Ins(1) | -/A | rs5807306 (DbSNP) | |
14 | 25,827,151 | 25,827,150 | Ins(1) | -/A | rs35544950 (DbSNP) | |
14 | 25,827,306 | 25,827,306 | SNP | A/G | rs1956944 (DbSNP) | |
14 | 25,827,360 | 25,827,360 | SNP | A/G | rs17109756 (DbSNP) | |
14 | 25,827,414 | 25,827,413 | Ins(6) | -/CTCTCT | rs71121825 (DbSNP) | |
14 | 25,827,414 | 25,827,414 | SNP | C/T | rs73606836 (DbSNP) | |
14 | 25,827,688 | 25,827,688 | SNP | C/T | rs73606838 (DbSNP) | |
14 | 25,827,845 | 25,827,845 | SNP | A/C | rs12431781 (DbSNP) | |
14 | 25,827,907 | 25,827,907 | SNP | A/C | rs12435561 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.