OR7L1P Olfactory Receptor
Gene Symbol | OR7L1P1 (View this gene in GeneCards) |
Family | 7 |
Subfamily | L |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | ORL4075 |
External Ids | HGNC: 14827 GeneBank: NG_002258 ORDB: ORL4075 |
Build #39 labels | OR7L1P |
Chromosomal location | X:131,596,121-131,597,203 (+) |
Cluster | X@131b |
Synteny | CLIC#48 |
Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR13C5 | 41.32% | 167 |
OR2C1 | 40.31% | 129 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Mouse | Or7d12-ps | 44% | 129 |
Orang | OR7AA1P | 82% | 138 |
Chimp | OR7AA1P | 97% | 111 |
Sequence information
Nucleotide sequence |
ATGATTTCCTCAGATGAAGAAAATGATACAAATATGATGGAATTTATTCTGGTAGGACTG TCCAGACAGCCTGCATCTCAGCTACTCTTCTTTTAGGCAATATTGTTCATCTACTCTGTC ACCCTGGTTGGTAATATTCTCATCATTGTTATTATCCAGATTGATTCCCATCTTCAAACC CCCATGTACTTCTTTCTCATACAAGTATCCTTCTTAGATATCTGCTCCACACCCACGGTT CTGGTGAACTGCTAGAAGGACTTTCCAAGTGTATCCTATAGTGGCTGCTTATTCTAAATG ACTATCTTTCTTTACTTAGGGGTGACGGAGTGTGAGTGTTTTCTTATTGCTGTTATGGCC TATGACAGGTTTGTTGCCATCTCAAAACCCTTGTGTTACCCATTCATTATCAATAGCAAT GTTTGCATCTGGATGGTGGCAGGAGTTTGGGCCCATCCTGGTCGCACCAATCCAATTCTG TGGCCACAATGTAGTCAACATTTTACATGTGAGCTCCAAGTAATTTTCAAACTCACTTGC TCTCCTGTACTAGTCAAAGAGATCCAGTGATTCATGATTCCAGGTTGTACATTATAGGCA TTGTATCAGCATTAAGTGTGCTCCTACAGTTAAGCTCGCCAGCAAACCCATCCCAGGAGC TGAGAGGCATACAATTAGGGCATAAGGTGAGGTATTATCGGGGTACACTTACACAAAGTA TGTTGAAACTCACACAGCCAATTGCCATAATGACCATTGAATTAGCACAT |
Conceptual translation |
MISSDEENDTNMMEFILVGLSRQPASQLLFFXILFIYSVTLVGNILIIVIIQIDSHLQT PMYFFLIQVSFLDICSTPTVLVNCXDFPSVSYSGCLFXTIFLYLGVTECVFFLFCFVL FF/VGVSLCHLGWSAMAQSWLPATSTSWVQTVRLPQPPEXGLQVPATMTSXLYFXR RGFTILVRLVLNSXHDPPALASQSVGITGVSHHAQPSVFLLLLWPMTGLLPSQNPCVTH SLSIAMF/IWMVAGVWA\LVAPIQFCGHNVV/HFTCELQVIFKLTCSPVLVKEIQX MIPGCTLXLYQHXCSYSXRQQT/SQELRGIQLGHKVRYYRGTLTQSMLKLTQPIAI MTIELAHRX Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
X | 130,730,469 | 130,730,469 | SNP | A/G | rs859858 (DbSNP) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
CopyNumber | 148 (Hasin) | |||
X | 130,729,995 | 130,733,177 | Deletion | #323 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.