OR7L1P Olfactory Receptor
| Gene Symbol | OR7L1P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | L |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL4075 |
| External Ids | HGNC: 14827 GeneBank: NG_002258 ORDB: ORL4075 |
| Build #39 labels | OR7L1P |
| Chromosomal location | X:131,596,121-131,597,203 (+) |
| Cluster | X@131b |
| Synteny | CLIC#48 |
| Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR13C5 | 41.32% | 167 |
| OR2C1 | 40.31% | 129 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Mouse | Or7d12-ps | 44% | 129 |
| Orang | OR7AA1P | 82% | 138 |
| Chimp | OR7AA1P | 97% | 111 |
Sequence information
| Nucleotide sequence |
ATGATTTCCTCAGATGAAGAAAATGATACAAATATGATGGAATTTATTCTGGTAGGACTG TCCAGACAGCCTGCATCTCAGCTACTCTTCTTTTAGGCAATATTGTTCATCTACTCTGTC ACCCTGGTTGGTAATATTCTCATCATTGTTATTATCCAGATTGATTCCCATCTTCAAACC CCCATGTACTTCTTTCTCATACAAGTATCCTTCTTAGATATCTGCTCCACACCCACGGTT CTGGTGAACTGCTAGAAGGACTTTCCAAGTGTATCCTATAGTGGCTGCTTATTCTAAATG ACTATCTTTCTTTACTTAGGGGTGACGGAGTGTGAGTGTTTTCTTATTGCTGTTATGGCC TATGACAGGTTTGTTGCCATCTCAAAACCCTTGTGTTACCCATTCATTATCAATAGCAAT GTTTGCATCTGGATGGTGGCAGGAGTTTGGGCCCATCCTGGTCGCACCAATCCAATTCTG TGGCCACAATGTAGTCAACATTTTACATGTGAGCTCCAAGTAATTTTCAAACTCACTTGC TCTCCTGTACTAGTCAAAGAGATCCAGTGATTCATGATTCCAGGTTGTACATTATAGGCA TTGTATCAGCATTAAGTGTGCTCCTACAGTTAAGCTCGCCAGCAAACCCATCCCAGGAGC TGAGAGGCATACAATTAGGGCATAAGGTGAGGTATTATCGGGGTACACTTACACAAAGTA TGTTGAAACTCACACAGCCAATTGCCATAATGACCATTGAATTAGCACAT |
| Conceptual translation |
MISSDEENDTNMMEFILVGLSRQPASQLLFFXILFIYSVTLVGNILIIVIIQIDSHLQT PMYFFLIQVSFLDICSTPTVLVNCXDFPSVSYSGCLFXTIFLYLGVTECVFFLFCFVL FF/VGVSLCHLGWSAMAQSWLPATSTSWVQTVRLPQPPEXGLQVPATMTSXLYFXR RGFTILVRLVLNSXHDPPALASQSVGITGVSHHAQPSVFLLLLWPMTGLLPSQNPCVTH SLSIAMF/IWMVAGVWA\LVAPIQFCGHNVV/HFTCELQVIFKLTCSPVLVKEIQX MIPGCTLXLYQHXCSYSXRQQT/SQELRGIQLGHKVRYYRGTLTQSMLKLTQPIAI MTIELAHRX Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| X | 130,730,469 | 130,730,469 | SNP | A/G | rs859858 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 148 (Hasin) | |||
| X | 130,729,995 | 130,733,177 | Deletion | #323 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.