OR7M1P Olfactory Receptor
| Gene Symbol | OR7M1P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3272 |
| External Ids | HGNC: 15128 GeneBank: NG_004250 ORDB: ORL3272 |
| Build #39 labels | OR7M1P |
| Chromosomal location | 10:133,481,221-133,481,770 (+) |
| Cluster | 10@135 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR13A1 | 57.14% | 21 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Chimp | OR7M2P | 98% | 105 |
Sequence information
| Nucleotide sequence |
ATGGCAGCAGACAACCACACAGCGTAGAGGCGTTTGTCCTGCAGGGTTTCTCTGAAGACC TTCCACTCCAGGGCTGCTGCTTTGCTTTTTTCCTCCTTTACCTGATGGCACTTGTAGGAA ACATCCTCATGGTCATGGCCATCAGTCTGAATCCAGGCCTCCACACGCCAGTGTACTTCT TTCTCACCAACCTGGCCCTTTTAGACATCGTCTGCACATCCATGGACAACAGCAGAGTGG TGGCTGTGCTGTACACAGTGGTCAGCCCCACCCTGAACCCCTCACCTACTCCCTGCGGAA CAAGGACTTATCAGTAGCACTGAGGAGAGTGTTTTCTTGCATCAGGTAAAAGGAAGGGAA GTTTCTAGTGTGAAATGTTCCAGGTGTTAACAAACTAATTTCAACATATGACTTTGAGAA TCTCATGCAAGCAGCAAGGAACAAGAAAGTAATTAATGCCACATATTTATAAATAATGTG CTCCCGCACGGGGCTGCCATCATTCAATGTGGAACTCCCAACATCCCAAGGCTGTATGGG TAGGTGCAGT |
| Conceptual translation |
MAADNH/SVEAFVLQGFSEDLPLQGCCFAFFLLYLMALVGNILMVMAISLNPGLHTPVY FFLTNLALLDIVCTSMDNSRVVAVLYTVVSPTLNPSPTPCGTRTYQXXECFLASGKRK GSFXEMFQVLTNXQHMTLRIS/QAARNKKVINATYLXMCSRTGLPSFNVELPTSQG CMGRCS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 10 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 10 | 133,481,230 | 133,481,230 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 10 | 133,481,262 | 133,481,262 | SNP | C/T | 1000GP (CHBJPT) | |
| 10 | 133,481,268 | 133,481,268 | SNP | T/C | 1000GP (CEU) | |
| 10 | 133,481,288 | 133,481,288 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 10 | 133,481,761 | 133,481,761 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 10 | 135,294,772 | 135,294,772 | SNP | C/T | rs72868346 (DbSNP) | |
| 10 | 135,294,792 | 135,294,792 | SNP | C/T | rs72868347 (DbSNP) | |
| 10 | 135,294,857 | 135,294,857 | SNP | A/T | rs73395386 (DbSNP) | |
| 10 | 135,295,231 | 135,295,231 | SNP | A/G | rs73395389 (DbSNP) | |
| 10 | 135,295,265 | 135,295,265 | SNP | C/T | rs12247760 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 154 (Hasin) | |||
| 10 | 135,018,168 | 135,432,685 | CopyNumber | Variation_2896 (DGV) |
| 10 | 135,079,862 | 135,434,551 | CopyNumber | Variation_8673 (DGV) |
| 10 | 135,184,119 | 135,434,551 | CopyNumber | Variation_8671 (DGV) |
| 10 | 135,184,421 | 135,434,551 | CopyNumber | Variation_34537 (DGV) |
| 10 | 135,202,013 | 135,386,618 | CopyNumber | Variation_34865 (DGV) |
| 10 | 135,202,594 | 135,434,303 | CopyNumber | Variation_29602 (DGV), Variation_53644 (DGV) |
| 10 | 135,217,956 | 135,377,448 | CopyNumber | Variation_48474 (DGV), Variation_53842 (DGV) |
| 10 | 135,217,956 | 135,434,303 | CopyNumber | Variation_48475 (DGV) |
| 10 | 135,222,326 | 135,390,508 | CopyNumber | Variation_3830 (DGV) |
| 10 | 135,228,871 | 135,390,508 | CopyNumber | Variation_2162 (DGV) |
| 10 | 135,236,012 | 135,387,833 | CopyNumber | Variation_6852 (DGV) |
| 10 | 135,237,022 | 135,400,723 | CopyNumber | Variation_65826 (DGV) |
| 10 | 135,242,877 | 135,296,269 | CopyNumber | Variation_37784 (DGV) |
| 10 | 135,249,289 | 135,391,722 | CopyNumber | Variation_75467 (DGV) |
| 10 | 135,252,350 | 135,505,981 | CopyNumber | Variation_30527 (DGV) |
| 10 | 135,258,147 | 135,377,448 | CopyNumber | Variation_53981 (DGV) |
| 10 | 135,263,450 | 135,340,314 | CopyNumber | Variation_75469 (DGV) |
| 10 | 135,266,388 | 135,377,448 | CopyNumber | Variation_29599 (DGV) |
| 10 | 135,266,389 | 135,369,054 | CopyNumber | Variation_48476 (DGV) |
| 10 | 135,266,389 | 135,369,532 | CopyNumber | Variation_48477 (DGV) |
| 10 | 135,266,389 | 135,370,005 | CopyNumber | Variation_48478 (DGV) |
| 10 | 135,266,389 | 135,377,448 | CopyNumber | Variation_9648 (DGV), Variation_48479 (DGV), Variation_48480 (DGV) |
| 10 | 135,266,389 | 135,434,303 | CopyNumber | Variation_53803 (DGV) |
| 10 | 135,269,955 | 135,388,119 | CopyNumber | Variation_9170 (DGV) |
| 10 | 135,269,955 | 135,434,551 | CopyNumber | Variation_8670 (DGV), Variation_34564 (DGV) |
| 10 | 135,273,674 | 135,306,042 | CopyNumber | Variation_75470 (DGV) |
| 10 | 135,282,609 | 135,297,474 | CopyNumber | Variation_85567 (DGV) |
| 10 | 135,290,331 | 135,295,401 | CopyNumber | Variation_71202 (DGV) |
| 10 | 135,290,968 | 135,297,474 | CopyNumber | Variation_75471 (DGV), Variation_85566 (DGV) |
| 10 | 135,290,968 | 135,300,330 | CopyNumber | Variation_75472 (DGV) |
| 10 | 135,290,968 | 135,326,034 | CopyNumber | Variation_85568 (DGV) |
| 10 | 135,290,968 | 135,331,746 | CopyNumber | Variation_75466 (DGV) |
| 10 | 135,294,625 | 135,297,274 | CopyNumber | #151 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.