Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR8A2P Olfactory Receptor

Gene Symbol OR8A2P1 (View this gene in GeneCards)
Family 8
Subfamily A
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-314, HsOR11.18.37P, ORL3649
External Ids HGNC: 15306   GeneBank: BK004641, NG_004341   ORDB: ORL3649   
Build #39 labels OR8A2P
Chromosomal location 11:124,460,564-124,461,526 (+)
Cluster 11@124
Synteny CLIC#29
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR8A1 74.92% 307

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR8A1 74% 307
Mouse Or8a1-ps 69% 307
Rat Or8a1b 70% 307
Cow OR8A1 73% 307
Orang OR8A1 72% 308
Horse OR8A1 73% 307
Chimp OR8A1 75% 307

Sequence information

Nucleotide sequence ATGACTGTCAAAAGTCATTCTATAGTGACAGAGTTCAGTCTCAGGGGATTAACGAAGCAG
CCAGATCTCCAGCTCTTTCACTTCCTCATTTTCCTTGATATCCATATGGTCACAATGGTG
GGGAACTTGGGCATGATCACTCTAATTTGTCTTAACTCTCAGCTTCACACCCCCATGTAC
TACTTCTTCAGCAATCTGTCACTCTTGGATCTCTGCTATTCCTCCATTACTAACCCTAAG
ATGCTGGTGAACTTTGTGTTAAAGAAGAGCATTATCTCTTATGCAGGGTACATGTCATAG
TTCTACTTTTTCCTGGTTTTTGTCATTGCTAGGTGTTACATGCTGATGGTGAAGGCCTGT
GACCACTATGTTGCCATCTGCTGCCCTTTGCTTTGCAACGTCATCATGTCTCATGTCACC
TGCTCCCTGATGGTGGCTGTGGTCTACACCATGGGACTCGTTGTCTCCACAATAGAGACT
GGGCTCATATTAAAACTGCCCTATTGTGAACTCCTCACCAGTCGCTGCTTCTGTGACATC
CTCCCTCTCATGAAACTCTCCTGATCTAGTGCCTATGATGTTGAGATGGCAGTCTTCTTT
TTTGCTAGATTCAACCTGAGAATCATGATCTTAACAGTTCTTGTTTCTTACACCTTCATT
CTCTTCAGCATCCTGCACATCAGCACCACTGAGGGCAGGTCCAAAGTCTTCAGCACCTGC
AGCTTCCACCTTGCAGCTATAGGGATGTTCCATGGATAGACTGCATTCAGGTACTTAAAA
CCCGCCATAACCAGTTCCCTGGCCCAAGAGAATGTGGCCTCTGTGTTCTACACTACAGTA
ATCTACGTGCCGAATCCCCTAATGTACAGCCTGAAAAACAAGGATGTAAAAGCTGCCATG
CAGAAAACACTAAGGAGTAAGTTTTGTTGCAGATGTAATTATCTTGAGTTGCTAATCAAC
CCA
Conceptual translation MTVKSHSIVTEFSLRGLTKQPDLQLFHFLIFLDIHMVTMVGNLGMITLICLNSQLHTPMY
YFFSNLSLLDLCYSSITNPKMLVNFVLKKSIISYAGYMSXYFFLVFVIARCYMLMVKAC
DHYVAICCPLLCNVIMSHVTCSLMVAVVYTMGLVVSTIETGLILKLPYCELLTSRCFCDI
LPLMKLSXSAYDVEMAVFFFARFNLRIMILTVLVSYTFILFSILHISTTEGRSKVFSTC
SFHLAAIGMFHGXAFRYLKPAITSSLAQENVASVFYTTVIYVPNPLMYSLKNKDVKAAM
QKTLRSKFCCRCNYLELLINP

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 124,331,111 124,331,111 SNP A/C rs58797620 (DbSNP)
11 124,330,975 124,330,975 SNP A/C rs58285921 (DbSNP)
11 124,330,983 124,330,983 SNP A/G rs12787539 (DbSNP)
11 124,331,330 124,331,330 SNP C/G rs12792592 (DbSNP)
11 124,330,757 124,330,757 SNP C/T rs73613289 (DbSNP)
11 124,331,100 124,331,100 SNP C/T rs56674022 (DbSNP)
11 124,331,285 124,331,285 SNP G/T rs57379931 (DbSNP)
11 124,460,861 124,460,861 SNP T/C 1000GP (CEU, CHBJPT)
11 124,461,079 124,461,079 SNP C/A 1000GP (CEU, CHBJPT)
11 124,461,087 124,461,087 SNP G/A 1000GP (CEU, CHBJPT)
11 124,461,204 124,461,204 SNP T/C 1000GP (CEU, CHBJPT)
11 124,461,434 124,461,434 SNP C/G 1000GP (CEU, CHBJPT)
11 124,461,487 124,461,487 SNP T/C 1000GP (CEU)
11 100 -100 SNP A/G 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 203 (Hasin)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.