OR8A3P Olfactory Receptor
Gene Symbol | OR8A3P1 (View this gene in GeneCards) |
Family | 8 |
Subfamily | A |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | HsOR11.18.40P |
External Ids | HGNC: 31315 GeneBank: NG_004439 |
Build #39 labels | |
Chromosomal location | 11:124,531,606-124,531,984 (+) |
Cluster | 11@124 |
Synteny | CLIC#29 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR8A1 | 83.52% | 91 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|
Sequence information
Nucleotide sequence |
CTCTGTCTCGAAGAAAAAAAAAATCACTCTACAGTGACAGAGTTCATTCTCAGGGGATTA ACAAAGCAACCAGATTTCCAGCTCCCTCTTTTTCTCCTCTTCCTCAGGATCTGCTTGGTC ACCATGGTGGGGAACCTGGGCATGATCTCCCTGATTTGGCTGAACTCTCAGCTTCACACT CCCACGTACTACTTTTTCAGCAATCTGTCACTCGTGGATCTCTTCTACTCCTCCATCATT ACCCCTAAAATGCTGGTGAACTTTGTGCCAGAGAAAAACATCATCTCCTACGCAGAGAGG GGCATCAGGGAAAATGCCCCTTTCCCTCTCAAATGATGTTGCTCTTGATGGATGAGCTGC ATTATATGCTTTTTTCTAG |
Conceptual translation |
LCLEEKKNHSTVTEFILRGLTKQPDFQLPLFLLFLRICLVTMVGNLGMISLIWLNSQLHT PTYYFFSNLSLVDLFYSSIITPKMLVNFVPEKNIISYAERGIRENAPFPLKXCSXMSC IICFFL Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 124,401,606 | 124,401,606 | SNP | C/G | rs61243643 (DbSNP) | |
11 | 124,401,725 | 124,401,725 | SNP | G/T | rs11219687 (DbSNP) | |
11 | 124,531,829 | 124,531,829 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
11 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.