OR8A3P Olfactory Receptor
| Gene Symbol | OR8A3P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.18.40P |
| External Ids | HGNC: 31315 GeneBank: NG_004439 |
| Build #39 labels | |
| Chromosomal location | 11:124,531,606-124,531,984 (+) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8A1 | 83.52% | 91 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
CTCTGTCTCGAAGAAAAAAAAAATCACTCTACAGTGACAGAGTTCATTCTCAGGGGATTA ACAAAGCAACCAGATTTCCAGCTCCCTCTTTTTCTCCTCTTCCTCAGGATCTGCTTGGTC ACCATGGTGGGGAACCTGGGCATGATCTCCCTGATTTGGCTGAACTCTCAGCTTCACACT CCCACGTACTACTTTTTCAGCAATCTGTCACTCGTGGATCTCTTCTACTCCTCCATCATT ACCCCTAAAATGCTGGTGAACTTTGTGCCAGAGAAAAACATCATCTCCTACGCAGAGAGG GGCATCAGGGAAAATGCCCCTTTCCCTCTCAAATGATGTTGCTCTTGATGGATGAGCTGC ATTATATGCTTTTTTCTAG |
| Conceptual translation |
LCLEEKKNHSTVTEFILRGLTKQPDFQLPLFLLFLRICLVTMVGNLGMISLIWLNSQLHT PTYYFFSNLSLVDLFYSSIITPKMLVNFVPEKNIISYAERGIRENAPFPLKXCSXMSC IICFFL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 124,401,606 | 124,401,606 | SNP | C/G | rs61243643 (DbSNP) | |
| 11 | 124,401,725 | 124,401,725 | SNP | G/T | rs11219687 (DbSNP) | |
| 11 | 124,531,829 | 124,531,829 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.