OR8B10P Olfactory Receptor
| Gene Symbol | OR8B10P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-312, HsOR11.18.39P, ORL3484 |
| External Ids | HGNC: 14751 GeneBank: BK004639, NG_004342 ORDB: ORL3484 |
| Build #39 labels | OR8B10P |
| Chromosomal location | 11:124,516,310-124,517,242 (-) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8B12 | 80.39% | 311 |
| OR8B9P | 83.06% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8B9 | 81% | 311 |
| Dog | OR8B9B | 83% | 287 |
| Mouse | Or8b9 | 79% | 311 |
| Rat | Or8b9 | 79% | 311 |
| Cow | OR8B9C | 82% | 311 |
| Cow | OR8B9 | 80% | 311 |
| Orang | OR8B10 | 92% | 311 |
| Horse | OR8B9 | 81% | 311 |
| Horse | OR8B12JP | 81% | 311 |
| Chimp | OR8B9P | 81% | 307 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DB089874 |
Sequence information
| Nucleotide sequence |
ATGGCTGCCGAGAACTCCTCCTCCGTGACAGAGTTTATCCTCGCAGGCTTAATCCACCAG CCGGGACTCCAGGTCCCCGTCTTCTTCCTGTTTCTAGGTTTCTACGCGGTCACGGTGGTG GGGAACCTGGGCTTGATAATCCTGATAGGGCTCAACTCTCGCCTGCATATCCCCATGTAC TTTTTCCCCTTCAACTTGTCCCTCGTAGATTTTAGTTTCTCTACGACCATCATTCCCAAA ATGCTGATGAGTTTTGTCTCAAGGAAGAACATTATTTCCTTCACAGGGTGTATGAGTCAG TTCTTCTTCTTCTGTTTCTTTGTCTTTTCTGAGTCCTTCATCCTGTCGGCGATGGTGTAG GACCGCTACGTGGGCATCTGTAACCCACTGTTGTACACGATCACCATGTCTCCCCAGGTG TGTTTGCTCCTTTTACTGGGTGTCTACGGGATGGGGGTTTTTGGGGCTGTGGCTCATACA GGAAATATAGTGTTTCTCACCTTTTGTGCAGACAACCTTGTCAATCACTACATGTGTGAC ATCCTTCCCCTTCTTGAGCTCTCCTGCAACGGCTCTTACATAAATGTCCTGGTCATCTTT ATTGTTGTGACCGTTGGCATTGGGGTGCCCATTGTTGCCGTTTTTATCTCTTATGGTTTT ATTCTTTCCAGCATTCTCCGCGTTAGTTCTGCTGAGGGCAGGTCTAAAGCCTTCAGTAGC TGCAGCTCCTACATAATTGCAGTTTCTCTTTTCTTTGGGTCAGGAGCTTTTACGTACCTC AAACCCCCTTCCATTTTACCCCTGGACCAGGGGAAAGTGTCCTCCCTGTTCTATACCACT GTGGTGCCCATGTTTAACCCATTAATCTACAGCCTGAGGAATAAGGATGTCAAACTTGCC CTGAAGAGAACCTTTTCCAGAATAAGCTTTTCT |
| Conceptual translation |
MAAENSSSVTEFILAGLIHQPGLQVPVFFLFLGFYAVTVVGNLGLIILIGLNSRLHIPMY FFPFNLSLVDFSFSTTIIPKMLMSFVSRKNIISFTGCMSQFFFFCFFVFSESFILSAMVXbr/>DRYVGICNPLLYTITMSPQVCLLLLLGVYGMGVFGAVAHTGNIVFLTFCADNLVNHYMCD ILPLLELSCNGSYINVLVIFIVVTVGIGVPIVAVFISYGFILSSILRVSSAEGRSKAFSS CSSYIIAVSLFFGSGAFTYLKPPSILPLDQGKVSSLFYTTVVPMFNPLIYSLRNKDVKLA LKRTFSRISFS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 124,386,700 | 124,386,700 | SNP | A/C | rs73616904 (DbSNP) | |
| 11 | 124,386,783 | 124,386,783 | SNP | A/G | rs7111616 (DbSNP) | |
| 11 | 124,386,472 | 124,386,472 | SNP | A/G | rs4296050 (DbSNP) | |
| 11 | 124,386,765 | 124,386,765 | SNP | C/G | rs10893237 (DbSNP) | |
| 11 | 124,386,978 | 124,386,978 | SNP | C/T | rs7111961 (DbSNP) | |
| 11 | 124,386,346 | 124,386,346 | SNP | C/T | rs4282991 (DbSNP) | |
| 11 | 124,386,739 | 124,386,739 | SNP | C/T | rs10893236 (DbSNP) | |
| 11 | 124,516,450 | 124,516,450 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 124,516,557 | 124,516,557 | SNP | C/G | 1000GP (CEU) | |
| 11 | 124,516,576 | 124,516,576 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 124,516,843 | 124,516,843 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 124,516,869 | 124,516,869 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 11 | 124,516,887 | 124,516,887 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.