OR8G2P Olfactory Receptor
| Gene Symbol | OR8G2P (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-292, HSTPCR120, HsOR11.18.22 |
| External Ids | GeneBank: AB065943, AB065948, BK004426, HSTPCR120, NM_001007249 |
| Build #39 labels | OR8G2, OR8G4 |
| Chromosomal location | 11:124,224,732-124,225,678 (+) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8G3P | 91.86% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Expression evidences
| Source | Accession |
|---|---|
| mRNA | X89669 |
| GNF Atlas2 | gnf1h05802_at |
Sequence information
| Nucleotide sequence |
ATGTCAGCAGGAAACCATTCCTCAGTGACTGAGTTCATTCTGGCTGGGCTCTCAGAACAG CCAGAGCTCCAGCTGCGCCTCTTCCTCCTGTTCTTAGGAATCTATGTGGTCACAGTGGTG GGCAACTTGAGCATGATCACACTGATTGGGCTCAGTTCTCACCTGCATACCCCCATGTAC TATTTCCTCAGTGGTCTGTCCTTCATTGATATCTGCCATTCCACTATCATTACCCCCAAA ATGCTGGTGAACTTTGTGACAGAGAAGAACATCATCTCCTACCCTGAATGCATGACTCAG CTTTACTTCTTCCTCATTTTTGCTATTGCAGAGTGTCACATGTTGGCTGTAACGGCATAT GACCGCTATGTTGCCATCTGCAGCCCCTTGCTGTACAATGTCATCATGTCCTATCACCAC TGCTTCTGGCTCACAGTGGGAGTTTACATTTTAGGCATCCTTGGATCTACAATTCACACC GGCTTTATGTTGAGACTCTTTTTGTGCAAGACTAATGTGATTAACCATTATTTTTGTGAT CTCTTCCCTCTCTTGGGGCTCTCCTGCTCCAGCACCTACATCAATGAATTACTGGTTCTG GTCTTGAGTGCATTTAACATCCTGACGCCTGCCTTAACCATCCTTGCTTCTTACATCTTT ATCATTGCCAGCATCCTCCGCATTCGCTCCACTGAGGGCAGGTCCAAAGCCTTCAGCACT TGCAGCTCCCACATCTTGGCTGTTGCTGTTTTCTTTGGGTCTGCAGCATTCATGTACCTG CAGCCATCATCTGTCAGCTCCATGGACCAGGGGAAAGTGTCCTCTGTGTTTTATACTATT GTTGTGCCCATGCTGAACCCCCAATCTATAGCCTAAGAAATAAGGATGTCAAATTTGCCC TGAAGAAAAATCTGGACAGCAAAGCATGTTCATGAATCCAATTATTG |
| Conceptual translation |
MSAGNHSSVTEFILAGLSEQPELQLRLFLLFLGIYVVTVVGNLSMITLIGLSSHLHTPMY YFLSGLSFIDICHSTIITPKMLVNFVTEKNIISYPECMTQLYFFLIFAIAECHMLAVTAY DRYVAICSPLLYNVIMSYHHCFWLTVGVYILGILGSTIHTGFMLRLFLCKTNVINHYFCD LFPLLGLSCSSTYINELLVLVLSAFNILTPALTILASYIFIIASILRIRSTEGRSKAFST CSSHILAVAVFFGSAAFMYLQPSSVSSMDQGKVSSVFYTIVVPMLNP/IYSLRNKDVKF ALKKNLDSKACSXQLL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI) | |
| 11 | 124,095,525 | 124,095,525 | SNP | C/T | rs11219508 (DbSNP) | |
| 11 | 124,095,647 | 124,095,647 | SNP | C/A | rs2466615 (DbSNP) | |
| 11 | 124,095,884 | 124,095,884 | SNP | G/A | rs2466614 (DbSNP) | |
| 11 | 124,095,916 | 124,095,916 | SNP | C/T | rs11825213 (DbSNP) | |
| 11 | 124,096,122 | 124,096,122 | SNP | A/G | rs7946182 (DbSNP) | |
| 11 | 124,096,195 | 124,096,195 | SNP | A/G | rs7946214 (DbSNP) | |
| 11 | 124,096,247 | 124,096,247 | SNP | G/A | rs2466613 (DbSNP) | |
| 11 | 124,096,275 | 124,096,275 | SNP | T/C | rs2512268 (DbSNP) | |
| 11 | 124,096,277 | 124,096,277 | SNP | G/A | rs2466612 (DbSNP) | |
| 11 | 124,224,942 | 124,224,942 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 11 | 124,225,211 | 124,225,211 | SNP | C/T | 1000GP (CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 124,087,304 | 124,095,915 | CopyNumber | Variation_37664 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR8G2.aApr07-unspliced | main_exon | 5UTR | chr11 | 124,224,693 | 124,224,732 | + |
| CDS_partial | chr11 | 124,224,732 | 124,225,607 | + | ||