OR8G3P Olfactory Receptor
| Gene Symbol | OR8G3P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | 0.96 (pseudogene) |
| Aliases | OR11-288, OR11-297, HsOR11.18.21P, ORL3434 |
| External Ids | HGNC: 14698 GeneBank: AB065947, BK004424, BK004636, NG_004312 ORDB: ORL3434 |
| Build #39 labels | OR8G3P |
| Chromosomal location | 11:124,214,749-124,215,684 (+) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks | Full ORF without a suitable ATG |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8G2P | 91.86% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8G3 | 83% | 310 |
| Mouse | Or8g2 | 83% | 304 |
| Rat | Or8g2 | 80% | 309 |
| Cow | OR8G3D | 85% | 303 |
| Orang | OR8G3 | 91% | 310 |
| Orang | OR8G3G | 91% | 306 |
| Horse | OR8G3 | 86% | 307 |
| Horse | OR8G3H | 83% | 310 |
| Horse | OR8G3KP | 85% | 304 |
| Chimp | OR8G5 | 78% | 303 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BX280907 |
Sequence information
| Nucleotide sequence |
AAGATCGTGGACCCTGGAAACCATTCCTCAGTGACTGAGTCCATTCTGGCTGGGCTCTCA GAACAGCCAGAGCTCCAGCTGCGCCTCTTCCTCCTGTTCTTAGGAATCTGTGTGGTCACA GTGGTGGGCAACTTGGGCATGATCACACTGATTGGGCTCAGTTCTCACCTGCACACACCT ATGTACTATTTCCTCAGCAGTCTGTCCTTCATTGACTTCTGCCATTCCACTGTCATTACC CCTAAGATGCTGGTGAACTTTGCGACAGAGAAGAACATCATCTCCTACCCTGAATGCATG GCTCAGCTCTATTTATTCAGTATTTTTGCTATTGCAGAGTGTCACATGTTGGCTGCAATG GCGTATGACTGTTATGTTGCCATCTGCAGCCCCTTGCTGTACAATGTCATCATGTCCTAT CACCACTGCTTCTGGCTCACAGTGGGAGTTTACATTTTAGGCATCCTTGGATCTACAATT CATACCAGTTTTATGTTGAGACTCTTTTTGTGCAAGACTAATGTGATTAACCATTATTTT TGTGATCTTTTCCCTCTCTTGGGGCTCTCCTGCTCCAGCACCTACATCAATGAATTACTG GTTCTGGTCTTGAGTGCATTTAACATCCTGATGCCTGCCTTAACCATCCTTGCTTCTTAC ATCTTTATCATTGCCAGCATCCTCCGCATTCACTCCACTGAGGGCAGGTCCAAAGCCTTT AGCACTTGCAGCTCCCACATCTTGGCTGTTGCTGTTTTCTTTGGATCTGCAGCATTCATG TACCTGCAGCCATCATCTGTCAGCTCCATGGACCAGAGGAAAGTGTCGTCTGTGTTTTAT ACTACTATTGTGCCCATGCTGAACCCCCTGATCTACAGCCTGAGGAATAAAGATGTCAAA CTTGCCGTGAAGAAAATTCTGCATCAGACAGCATGT |
| Conceptual translation |
KIVDPGNHSSVTESILAGLSEQPELQLRLFLLFLGICVVTVVGNLGMITLIGLSSHLHTP MYYFLSSLSFIDFCHSTVITPKMLVNFATEKNIISYPECMAQLYLFSIFAIAECHMLAAM AYDCYVAICSPLLYNVIMSYHHCFWLTVGVYILGILGSTIHTSFMLRLFLCKTNVINHYF CDLFPLLGLSCSSTYINELLVLVLSAFNILMPALTILASYIFIIASILRIHSTEGRSKAF STCSSHILAVAVFFGSAAFMYLQPSSVSSMDQRKVSSVFYTTIVPMLNPLIYSLRNKDVK LAVKKILHQTAC Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI) | |
| 11 | 124,085,462 | 124,085,462 | SNP | A/G | rs948071 (DbSNP) | |
| 11 | 124,085,672 | 124,085,672 | SNP | T/G | rs73017549 (DbSNP) | |
| 11 | 124,085,880 | 124,085,880 | SNP | G/A | rs2466727 (DbSNP) | |
| 11 | 124,086,004 | 124,086,004 | SNP | C/T | rs56941021 (DbSNP) | |
| 11 | 124,086,087 | 124,086,087 | SNP | C/T | rs59923179 (DbSNP) | |
| 11 | 124,086,175 | 124,086,175 | SNP | C/T | rs2508890 (DbSNP) | |
| 11 | 124,214,755 | 124,214,755 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 124,215,468 | 124,215,468 | SNP | T/C | 1000GP (CHBJPT) | |
| 11 | 124,215,655 | 124,215,655 | SNP | G/A | 1000GP (CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 104 (Hasin) | |||
| 11 | 124,084,883 | 124,086,991 | CopyNumber | Variation_34920 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR8G3P.aApr07-unspliced | main_exon | CDS_partial | chr11 | 124,215,133 | 124,215,684 | + |
| 3UTR | chr11 | 124,215,684 | 124,215,908 | + | ||