OR8I1P Olfactory Receptor
| Gene Symbol | OR8I1P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | I |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-176, HsOR11.11.58P, ORL3512 |
| External Ids | HGNC: 14828 GeneBank: AF399351, BK004767, NG_004147 ORDB: ORL3512 |
| Build #39 labels | OR8I1P |
| Chromosomal location | 11:56,296,540-56,297,470 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8I2 | 82.2% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8I2P | 81% | 307 |
| Mouse | Or8i2 | 77% | 304 |
| Rat | Or8i2 | 77% | 306 |
| Cow | OR8I2 | 77% | 309 |
| Orang | OR5E1P | 49% | 308 |
| Horse | OR8I2 | 78% | 309 |
| Chimp | OR8I2 | 81% | 309 |
Sequence information
| Nucleotide sequence |
TTGATATAAACAGCTGGCAGCAATTTCACTGAGGTGACTGTCTTCATCCTCTCTGGATAT GCAAATCACCCTGAATTACAAGTCAGTTTTTTCTTGATGTTTCTCTTCATTTATCTATTC ACTATTTTGGGAAACCTGGGACTGATCATGTTAATCAGAATGGATTCTCAGCTTCACACC CCTATGTACTTTTTCCTCAGCAATTTAGCATTCATTGACATATTTTACTCCTCTTCCGTA ACACCTAAGACATTGGCGAATTTCCAATCCAATCAGAGATCCATCTCCTTTGTTGGCTGC TTTGTTCAAATGTACTTTTCTGTTGGATTGGTGTGTACTGAGTGTTTCCTGCTGGGATCA ATGGCCTATGATTGCTATGTAGCAATCTGGAATCCCTCATTCAGTAGTCATTTCTTAGAA AGCGTGCAACTGGCTGGGAGTAATGTCATACACGATAGGTTTCACAAATTCTCTGGTATC TGTCTGTGTGATAAGTGGTTTTGTTCTGTGATTCCAGCATCAATCTTTTTTTTCTGTGAC ACCACAGCTCTTTTAGCACTGTCCTGTGTAGATGCATTCAGCACAGAAATGGTGAGCTTT GCCTTAGCTGGATTCACTCTTCTTGGCTCTATCCTTATCATCACAGTCACTTATATCGCC ATCACCTCAGCCATCCTGAAGAACCAGTGGGCAGCAGGATGGCAGAAGGCCTTCTCCACC TGCGCATTCCACCTCATGGGTTAACTATCTTCTATGGGTCCCTGATTTTCACCTATTTGC AACTGGATAAAACATCATCCCTGATCCACGCACAGTTGGCATTTGTATTCTATATGACTG TCATTCCCATGCTGAATCCACTCATCTAGAGTCTGAGGAACAAAGATGTAAAAAATGCTC TTTGAGAGTCATACATAGAAAACTTTTTCCA |
| Conceptual translation |
LIXAGSNFTEVTVFILSGYANHPELQVSFFLMFLFIYLFTILGNLGLIMLIRMDSQLHT PMYFFLSNLAFIDIFYSSSVTPKTLANFQSNQRSISFVGCFVQMYFSVGLVCTECFLLGS MAYDCYVAIWNP\SVVISXACNWLGVMSYTIGFTNSLVSVCVI\VLFCDSSIN\FF CDTTALLALSCVDAFSTEMVSFALAGFTLLGSILIITVTYIAITSAILKNQWAAGWQKAF STCAFHL/GLTIFYGSLIFTYLQLDKTSSLIHAQLAFVFYMTVIPMLNPLIXLRNKDV KNAL/RVIHRKLFP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,064,163 | 56,064,163 | SNP | A/G | rs17613241 (DbSNP) | |
| 11 | 56,064,088 | 56,064,088 | SNP | G/A | rs61736205 (DbSNP) | |
| 11 | 56,064,316 | 56,064,316 | SNP | G/T | rs17541133 (DbSNP) | |
| 11 | 56,296,687 | 56,296,687 | SNP | A/G | 1000GP (CEU) | |
| 11 | 56,296,840 | 56,296,840 | SNP | T/G | 1000GP (CEU) | |
| 11 | 56,296,995 | 56,296,995 | SNP | C/T | 1000GP (CEU) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.