OR8K2P Olfactory Receptor
| Gene Symbol | OR8K2P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | K |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.11.60P, ORL3513 |
| External Ids | HGNC: 14832 GeneBank: NG_004146 ORDB: ORL3513 |
| Build #39 labels | OR8K2P |
| Chromosomal location | 11:56,335,142-56,336,068 (+) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8K5 | 60.06% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8K5 | 58% | 303 |
| Mouse | Or8k17 | 54% | 311 |
| Rat | Or8k16b | 55% | 311 |
| Cow | OR8K5 | 59% | 297 |
| Horse | OR8K5 | 57% | 311 |
| Chimp | OR8K5P | 59% | 287 |
Sequence information
| Nucleotide sequence |
ATGGGCCAAAAGAATCTAACAGTGCTTACTGAATTAATTCTGATGGAAATCACAAGGCGG CTTGAGCTGCAGCTCTCCCTTTTTTGGGTCTTCCTCATCATCTGCACATTCACAGTGGTG AGCAAAGAGTGCATAATCATTTTGAACAATGTGGACTTGGGTCTACACAACATTTGTGTA TTTTTTAAATCAGGTACCTGAATTTTATTAATCTTGGTAATTCTATGGTCATTTATCCCA AGATACTGGTAAACTTTGTTGTGGCTCAAAATGCCATTCCCTGTTATGCATGTACCATGC AGATGGCTTTCTTCATTATGTTCATTATCTGTGAACTTTTCGTCTCATCAGCCATGGCCT ATGACCACTATGTGGACATCCATAGCCTTCTGCCATAAAATGTTATGTCTCAGGAACTTT GTCATGTGCTGGTGGTATTCCATACCTTTATAGTACCTTTCAAGCTCTGATGGTCACTAT AAAGATTTTTATATTGGCCTTCTATGGCTCCAATGTCATAAGTTATTTCTACTGTTAAGA TGTTTCTTTGTTAGCCATGGTGGACTCAAATGCATGAGGAATAGAAATGTTGATCACACT ATTTTCAGTACTTAATTTGATATTCTTTCTTCTGGTAGTCCTAATGTCCTCCATGCTGAT TCTATTAACTGTTTGTTGAATGCATTCTGCAGAGAGCAGTAAAAAACTTTCTTCACGTAT GTTTCTTGTCTGATAGTGGTGGTTGTGTTCTGTGGGTTTCTATACTTTATGTACTTGCAG CTCAAATTCAGTTCCTTTTTTTTTGATAATAATAAAATGACCTCCATGTTTTCCTCTTTA GTGATTACCATGCTTTACCATTTGGTCTGTAGTGTAAAGAACAAAGGGAGTAAAAAAAAT GCCTTCTATAGTTTTTTTATGAAGCAG |
| Conceptual translation |
MGQKNLTVLTELILMEITRRLELQLSLFWVFLIICTFTVVSKECIIILNNVDLGLHNICV FFKSG/LNFINLGNSMVIYPKILVNFVVAQNAIPCYACTMQMAFFIMFIICELFVSSAM AYDHYVDIHSLLPXVMSQELCHVLVV/PYLYSTFQALMVTIKIFILAFYGSNVISYFY CXVSLLAMVDSNAXIEMLITLFSVLNLIFFLLVVLMSSMLILLTVCXHSAES/XT FFTYVSCLIVVVVFCGFLYFMYLQLKFSSFFFDNNKMTSMFSSLVITMLYHLVCSVKNKG SKKNAFYSFFMKQ Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | A/C | 1000GP (YRI, YRI, YRI) | |
| 11 | 56,102,653 | 56,102,653 | SNP | A/C | rs6591233 (DbSNP) | |
| 11 | 56,102,827 | 56,102,827 | SNP | A/C | rs7119614 (DbSNP) | |
| 11 | 56,102,896 | 56,102,895 | Ins(1) | -/C | rs35163663 (DbSNP) | |
| 11 | 56,103,003 | 56,103,003 | SNP | C/G | rs12789200 (DbSNP) | |
| 11 | 56,103,051 | 56,103,050 | Ins(1) | -/G | rs11429321 (DbSNP) | |
| 11 | 56,103,052 | 56,103,051 | Ins(1) | -/G | rs71673113 (DbSNP) | |
| 11 | 56,103,075 | 56,103,074 | Ins(1) | -/T | rs35036863 (DbSNP) | |
| 11 | 56,103,342 | 56,103,341 | Ins(1) | -/C | rs36096385 (DbSNP) | |
| 11 | 56,103,490 | 56,103,490 | SNP | G/T | rs11600863 (DbSNP) | |
| 11 | 56,335,177 | 56,335,177 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 11 | 56,335,351 | 56,335,351 | SNP | A/C | 1000GP (CEU) | |
| 11 | 56,335,527 | 56,335,527 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 11 | 56,336,014 | 56,336,014 | SNP | T/G | 1000GP (CEU, CHBJPT) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.