OR8L1P Olfactory Receptor
| Gene Symbol | OR8L1P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | L |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-115, HsOR11.11.64P, ORL3519 |
| External Ids | HGNC: 15316 GeneBank: BK004720, NG_004183 ORDB: ORL3519 |
| Build #39 labels | OR8L1P |
| Chromosomal location | 11:56,381,635-56,382,589 (+) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AL1P | 63.52% | 318 |
| OR5AL2P | 59.49% | 311 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
ATGAAATACTTCTACACATATTTCATGGCCAAAACCAATAATTCAGAAGTTACTGAATTC ATCCTCTTGGGACTCACAGACAATCCAGAGCTCCAAGCCCTTTTTTAGGGGGATCTTTCT AGTGATCAATTTAAGTAGTGTCATGGGTAGCCTTGGGTTAATTATGCTAATTCATATCAG TCCTCAGCTTCACACAGCTATGTATTTTTTTCTCAGCCACGTAGCTTTTGTTTATTTTTG CTACACCTCCTCTATCACCCCTAACAGCCTAGTGAACCTCCTCCAAGAAACTAAAAGAAT ATCCTTACCTACTTGTGCCTCTCAGTTGCATTGCTTTATCATGTTTGTGGTTTGTGACAT GTATGTGCTCTCAGCCATGGCATATGACAGGTATGTGGCCATCTGCAACCCTTTACTCTA TAGTATCATCATGAACAGAAGGGTCTGTATTCAAATGGTGGTAAGTACATATTTGTATGG CTTTTCTGTGAGACTCCTACAGGCAATTCTTACATTCCACTTGTCTTTCTGAGATTCAAA TATAATAAATAATTCCTATTGTGATGATGTTCCCCTAGCATGTCTACCCTATCATAAAAA CCATTACAAAGATGTAAAAGAACTGATATTGTTCACACTTGCTGGTTTCAATACACTTTT CTCCCTTCTTATCATCCTCATCTCCTACATATCAGTACTGTCTGCCATTCTGAGAATTAA TTCAGCTGAAAGTAGACAAAAGGCATTTTCTACTTGTGACTCCCACCTGACTTCTATCAT CATATTTTATGGTATAATTACCTTCATGTATATGCAGTGAAAAACAAATAATTCTCTGGA TACAGACAAAATAGCTTCTGTTTTCTGTATTGTGAAAATTCCTTCAATATATAGCCTGAG GAACCACGAAGTCAAAGATGCTTTGAAGATGATTATGGAAAATCTATGTCTTACT |
| Conceptual translation |
MKYFYTYFMAKTNNSEVTEFILLGLTDNPELQALF\GIFLVINLSSVMGSLGLIMLIHI SPQLHTAMYFFLSHVAFVYFCYTSSITPNSLVNLLQETKRISLPTCASQLHCFIMFVVCD MYVLSAMAYDRYVAICNPLLYSIIMNRRVCIQMVVSTYLYGFSVRLLQAILTFHLSFXS NIINNSYCDDVPLACLPYHKNHYKDVKELILFTLAGFNTLFSLLIILISYISVLSAILRI NSAESRQKAFSTCDSHLTSIIIFYGIITFMYMQXTNNSLDTDKIASVFCIVKIPSIYSL RNHEVKDALKMIMENLCLT Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 56,149,127 | 56,149,127 | SNP | T/C | rs1945245 (DbSNP) | |
| 11 | 56,149,488 | 56,149,488 | SNP | A/T | rs7938411 (DbSNP) | |
| 11 | 56,149,549 | 56,149,549 | SNP | A/C | rs7935431 (DbSNP) | |
| 11 | 56,149,723 | 56,149,723 | SNP | T/C | rs949361 (DbSNP) | |
| 11 | 56,381,651 | 56,381,651 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 56,382,012 | 56,382,012 | SNP | T/A | 1000GP (CEU) | |
| 11 | 56,382,073 | 56,382,073 | SNP | A/C | 1000GP (CEU) | |
| 11 | 56,382,247 | 56,382,247 | SNP | T/C | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 56,118,942 | 56,149,196 | CopyNumber | Variation_34979 (DGV) |
| 11 | 56,137,843 | 56,150,075 | CopyNumber | Variation_34981 (DGV) |
| 11 | 56,142,239 | 56,156,355 | CopyNumber | Variation_34984 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.