OR8Q1P Olfactory Receptor
| Gene Symbol | OR8Q1P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | Q |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.18.43P, ORL3643 |
| External Ids | HGNC: 15317 GeneBank: NG_004182 ORDB: ORL3643 |
| Build #39 labels | OR8Q1P |
| Chromosomal location | 11:124,601,602-124,602,258 (+) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks | Disrupted by LTR repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8A1 | 45.27% | 243 |
| OR8A2P | 42.19% | 237 |
| OR8G5 | 38.11% | 244 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8A1 | 45% | 243 |
| Mouse | Or8a1b | 41% | 243 |
| Rat | Or8a1b | 41% | 243 |
| Cow | OR8A1F | 44% | 243 |
| Orang | OR8Q2P | 65% | 224 |
| Horse | OR8A1I | 44% | 243 |
| Chimp | OR8A1 | 43% | 243 |
Sequence information
| Nucleotide sequence |
ATGGCAGCAGAAAGTCACTCTACGGTGACAGAGTTCATTCTCAGGAAAAAGCCAGCAAGG GCTCCAGCTCCCCCTCTTCTAGGGATCTGTTTGAAAACCGTAGTGGGGGCCCTCATCTTG ATCACTCTAGTTTTCCTTAATTCTCAGCTTCACCCTCCCATGTACTACGTCATCAGAAAT TTATCATTTATGGATCACTGCAATTGCTCTATTAGTACCCCTAAAATACTGGTGAAGTTT GTGTTAGAGAAGACCATCATCTCCTATGAGGACGGCATGTCACAGCTTTGTAGTGCTTCG TGTTTATATTGTCATGGCCAAGCGTAACATGCGGACCAGCAACTGCTGTCATCACATTTC ATCAAGTCAGCTCCCTGCTGGTAGTTGTAGTATTTATATGGAGTTGACTGGTACAACAAT AGATATTTTGCCTTGTATTAAAATAGTACTAGTGTGAGTTATTCATCAGTCATACTTCTC TCATGCACTAGCATCTATGATATTGATAGGACAATTTTCTTTTTTACTTGATGCAATATT GTAGTCACTAGATTAACAGTTGTTTCCTACTCCTTTTCTCTCCAGCATCCTCCACATCAG CTTTACAAAGGGCAAGCTCTGGGTTTTTCCCGTAGGTCTGACGCATTCATGCTGTTG |
| Conceptual translation |
MAAESHSTVTEFILRKK\QGLQLPLFX/CLKTVVGALILITLVFLNSQLHPPMYYVI RNLSFMDHCNCSISTPKILVKFVLEKTIISYEDGMSQLCSA/VFILSWPSVTCGPATAV ITFHQVSSLLVVVVFIWSXVQQXFCLVLKXXEL\SVILLSCTSIYDIDRTIFFFT XNIVVTRLTVVSY/L/LSSILHISFTKGKLWVFPVGLTHSC Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 124,471,840 | 124,471,839 | Ins(1) | -/C | rs34070831 (DbSNP) | |
| 11 | 124,472,139 | 124,472,139 | SNP | A/C | rs11820079 (DbSNP) | |
| 11 | 124,472,006 | 124,472,006 | SNP | A/G | rs11820076 (DbSNP) | |
| 11 | 124,471,997 | 124,471,997 | SNP | A/G | rs11219730 (DbSNP) | |
| 11 | 124,471,503 | 124,471,503 | SNP | A/T | rs73622435 (DbSNP) | |
| 11 | 124,602,243 | 124,602,243 | SNP | C/T | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | A/T | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 13 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.