OR8V1P Olfactory Receptor
| Gene Symbol | OR8V1P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | V |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-267, HsOR11.11.52P |
| External Ids | HGNC: 19613 GeneBank: BK004819, NG_004299 |
| Build #39 labels | OR8V1P |
| Chromosomal location | 11:56,188,331-56,189,287 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8K3 | 74.19% | 310 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
ATGGACAAACACAATCTGACAGTAGTGAATGAATTCATTCTAATGGGAATCACGGACATC TCTGAGCTGCAGGCTCCATTATTTGGGTTCTCCCTCATTGTATACATGTTGTCAGTGGTG GGTAACTTAGGCTTGATCATCCTCACAAAGATAGATTCTAGGCTTCAAACACCCATGTAC TTTTTCCTAAGGCATCTGGCTTTCATTGATCTTGGTTATTCAACAGCAGTGGGACCCAAA ATGCTAGTAAACTTTGTTGTAGATCAACATATAATCTCCTATAATTAGTGTGCTACCCAA CTCACTTTCTTCAGTATATTTATCAGTAGTGAAATTTTCATTCTGTCAGCAATGGCCTAT GAACGCTATGTGGCCATTTGTAACCCTCTGCTCTATATGATCATCATGTCACAAAGGGCA TGTCAAATTCTAGTGGCAATACCTTATCTCTACAGTGTCTTTTTGACTTTGCTGACAGTC ACAAAAATGTTTACCTCATCATTTTGTGGCTATAACATCATCAAGCATTTCTACTGTGAT AGTCTGCCATTGATATCTTTGCTCTGTTCAGACACAGAAGACATTAAATTGATAATTTTA ATCTTTTCAGCTTTTAATTTGATTTCATCTCTTCTGATAGTCCTTGTGTCTTACATTCTG ATCCTTGTCGCCGTCCTCAGGATGAATTCTGCAGAAGGCAGGTACAAGGCCTTCTCCACC TGTGGAACTCACCTGACAGTGATAACTGTATTTTATGGCACCTTCTTCTTTATGTATGTT CACCCCAAATCCAGTCATTCACTTGATATTGACAAAATGGCCTCTTTATTTTATACTTTG ATAACACCTATGTTGAATCCAATGATCTACAGTTTGAGGAATAAAGAGATAAAAAATGCT CTACGTAGAACCTGGAAAATATGTGCAAATCATCTATTTAAAATTCATTGTAGGTTA |
| Conceptual translation |
MDKHNLTVVNEFILMGITDISELQAPLFGFSLIVYMLSVVGNLGLIILTKIDSRLQTPMY FFLRHLAFIDLGYSTAVGPKMLVNFVVDQHIISYNXATQLTFFSIFISSEIFILSAMAY ERYVAICNPLLYMIIMSQRACQILVAIPYLYSVFLTLLTVTKMFTSSFCGYNIIKHFYCD SLPLISLLCSDTEDIKLIILIFSAFNLISSLLIVLVSYILILVAVLRMNSAEGRYKAFST CGTHLTVITVFYGTFFFMYVHPKSSHSLDIDKMASLFYTLITPMLNPMIYSLRNKEIKNA LRRTWKICANHLFKIHCRL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 55,956,018 | 55,956,018 | SNP | A/G | rs59168428 (DbSNP) | |
| 11 | 55,956,040 | 55,956,040 | SNP | C/T | rs17150144 (DbSNP) | |
| 11 | 55,956,401 | 55,956,401 | SNP | G/T | rs4320968 (DbSNP) | |
| 11 | 55,956,489 | 55,956,488 | Ins(1) | -/C | rs35601611 (DbSNP) | |
| 11 | 56,188,542 | 56,188,542 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,188,925 | 56,188,925 | SNP | T/G | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 55,953,807 | 55,956,863 | Deletion | #221 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.