OR9G2P Olfactory Receptor
| Gene Symbol | OR9G2P1 (View this gene in GeneCards) |
| Family | 9 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-217, OR11-201, HsOR11.11.90P, ORL3565 |
| External Ids | HGNC: 15320 GeneBank: BK004598, BK004651, NG_004180 ORDB: ORL3565 |
| Build #39 labels | OR9G2P, OR9G6 |
| Chromosomal location | 11:56,750,997-56,751,984 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR9G1 | 58.72% | 298 |
| OR9G3P | 58.31% | 295 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR9G10 | 72% | 299 |
| Mouse | Or9g10-ps | 72% | 301 |
| Rat | Or9g10 | 73% | 298 |
| Cow | OR9G10 | 69% | 308 |
| Orang | OR9I2 | 45% | 308 |
| Horse | OR9G3 | 60% | 307 |
| Chimp | OR9G3P | 61% | 292 |
Sequence information
| Nucleotide sequence |
TACTCCAAAGAAATTATAGAATAATGTACTTCCAATGATATTATAAAATGTGGTTAGCAT AATAAGATTACTTTTTTTACTGTTTATCCTTTTAGAGTTCACAGAAGATTTGGGGTTACA GCAAGTGCTCTTTTTCATCTTTCTCATCATTTATGTCATCAGCCTCTCAGGCAACATCAT TCTGAATTCTCTCATCTGTGCTGATTCTTGGCCCTACACACCCATGTATTTCTTCACTGG AAACCGGTTCCTTCTGGATCTCTGGTATTCCTCTGTCCACATCCCCGATATCCTGCTGAC TTGCATTTCTGATGACAAAACCATCTCCTTTCCTGGCTGCCTTGCTCAGTTCTTCTCTGC TGTGTTGGCCTAAAATGAGTGCTATATGATGGCTTCCATGGCTTATGACCGCTACATGGC AATCTCCAAGCCCCTGCTTTATTCCCGGGCCACATTCCCAGAGTTATGTGCCAGTCTTGT TGAGGCTTCACACCTTGGCGGCTTTGTAAACTCAACCATCATCACCAGTGAGACACCTAC CTTGAGCTTCTGTGGCAGCAATATCATTGATGATTTCTTCTGTGATCTGCCCCCACTTGT AAAGTTGGTGTGTGATGTGAAGGAGCGCTACCAGGCTGTGCTGCATTTTATGCTTGCCTC CAATCATCACTCCCACTGCACTTATTCTTGCGTCCATCTCTTCATCATTGCAGCCATCTC GAAGATCCGTTCCATTAAGGGCCGCCTCCAGGTCTTCTCCACTTGTGGGTCTCCCCTGAC GGCTCTCACCTTGTACTATGGTGCAATCTTCTTTATTTACTCCCAACCAAGAACTAGCTA TGCCTTAAAAATGGATAAATTGGGGTCAGTGTTCTATACTGTGGTGATTCCAATGCTAAA CCCCTTGATCTATAGCTTAAGAAATAAGGATGTCAAAGATGCCTTGAAGAAAATGTTAGA TAGACTTCAGTTTCTTAAAGAAAAATAT |
| Conceptual translation |
YSKEIIEXTSNDIIKCGXNKITFFT\ILLEFTEDLGLQQVLFFIFLIIYVISLSGNI ILNSLICADSWPYTPMYFFTGNRFLLDLWYSSVHIPDILLTCISDDKTISFPGCLAQFFS AVLAXECYMMASMAYDRYMAISKPLLYSRATFPELCASLVEASHLGGFVNSTIITSETP TLSFCGSNIIDDFFCDLPPLVKLVCDVKERYQAVLHFMLASNHHSHCTYSCVHLFIIAAI SKIRSIKGRLQVFSTCGSPLTALTLYYGAIFFIYSQPRTSYALKMDKLGSVFYTVVIPML NPLIYSLRNKDVKDALKKMLDRLQFLKEKY Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,518,596 | 56,518,595 | Ins(1) | -/C | rs34910922 (DbSNP) | |
| 11 | 56,518,570 | 56,518,569 | Ins(1) | -/G | rs34116441 (DbSNP) | |
| 11 | 56,518,791 | 56,518,791 | SNP | A/G | rs12576079 (DbSNP) | |
| 11 | 56,519,175 | 56,519,175 | SNP | A/G | rs61902501 (DbSNP) | |
| 11 | 56,519,030 | 56,519,030 | SNP | A/G | rs11228768 (DbSNP) | |
| 11 | 56,519,314 | 56,519,314 | SNP | A/T | rs17151084 (DbSNP) | |
| 11 | 56,518,769 | 56,518,769 | SNP | C/T | rs17550900 (DbSNP) | |
| 11 | 56,519,015 | 56,519,015 | SNP | G/A | rs682143 (DbSNP) | |
| 11 | 56,751,293 | 56,751,293 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 56,751,315 | 56,751,315 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,751,539 | 56,751,539 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,751,554 | 56,751,554 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,751,699 | 56,751,699 | SNP | G/A | 1000GP (CEU) | |
| 11 | 56,751,838 | 56,751,838 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.