OR9M1P Olfactory Receptor
| Gene Symbol | OR9M1P1 (View this gene in GeneCards) |
| Family | 9 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.11.32P, ORL3551 |
| External Ids | HGNC: 15327 GeneBank: AB065784, NG_004177 ORDB: ORL3551 |
| Build #39 labels | OR9M1P, OR5BG1P |
| Chromosomal location | 11:55,855,592-55,856,521 (+) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AP2 | 55.23% | 306 |
| OR5AR1 | 52.27% | 308 |
| OR5I1 | 57.05% | 305 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR9M1 | 88% | 309 |
| Mouse | Or9m1 | 84% | 307 |
| Mouse | Or9m1b | 82% | 308 |
| Rat | Or9m1b | 83% | 309 |
| Cow | OR9M1 | 86% | 309 |
| Cow | OR9M1D | 84% | 309 |
| Orang | OR5G3 | 53% | 308 |
| Horse | OR9M1 | 87% | 309 |
| Horse | OR9M1E | 85% | 309 |
| Horse | OR9M1FP | 84% | 308 |
| Chimp | OR5I1P | 57% | 305 |
Sequence information
| Nucleotide sequence |
ATGGAGCTGGAGAATGGCACTGTGAAGACTGGGTTCTTTCTCCTGGGATTCAGCGACCAT CTGGAACTTCAGAGTCTCCTTTTTGCAGAATTTTTTTCCATCTACTCTGTTACTCTGATG GGGAACCTTGGAATGATTTTATTAATCACAATCAGTTCCCACTTGCACACTCCTATGTAC TTTTTCCTCTGTGTGTTGTCCTTCATAGATGCATGCTACTCTTCTGTCATTGCTCCCAAA TTACTTGTGAACTTGGTTTCTGAAAAGAAGACCATTTCTTACAATGGCTGTGTTGCACAG TTATATTTCTTCTGCTCTTTAGTTGACACAGAATCTTTCCTCTTGGCTGCCATGGCTTAA GACCGGTACATAGCAATCTGTAACCCGCTGCTCTATACAGTGATTATGTCCAAGAAGGTT TGTTGCCAGCTTGCAATTGGAGCATTTTTGGGGGGCACTATGAGCTCAATTATTCATACC ACGAACACTTTCCATCTGTCATTCTGCTCCAGAGATATTAACCATTTCTTTTGTGATATC TCCCCACTCTTCTCTCTGTCCTGCACTGACACATACATGCATGACATCATTCTGGTGGTC TTTGCCAGTTTTGTGGAAGCAATCTGTCTTCTATCAGTTCTCCTTTCTTATGTCTTCATT ATGGCAGCTATTCTTAGAACAGGTTCTGTGGAGGGAAGAAGAAGAGGGTTCTCCACTTGT GCTTCCCACCTGACTGTGGTCACTATGTATCATGGTACCTTGATCTTCATTTATTTGCGT CCCAGCACTGGCCATTCACTGGATATTGACAAAGTGACCTCTGTGTTCTATACTTTGATT ATACCTATGTTGAACCCTCTAATTTACAGTCTAAGGAACAAAGATGTCAAAAATGCTTTT AGAAAAGTGATTGGCCGAAAATTACTTCCT |
| Conceptual translation |
MELENGTVKTGFFLLGFSDHLELQSLLFAEFFSIYSVTLMGNLGMILLITISSHLHTPMY FFLCVLSFIDACYSSVIAPKLLVNLVSEKKTISYNGCVAQLYFFCSLVDTESFLLAAMAXbr/>DRYIAICNPLLYTVIMSKKVCCQLAIGAFLGGTMSSIIHTTNTFHLSFCSRDINHFFCDI SPLFSLSCTDTYMHDIILVVFASFVEAICLLSVLLSYVFIMAAILRTGSVEGRRRGFSTC ASHLTVVTMYHGTLIFIYLRPSTGHSLDIDKVTSVFYTLIIPMLNPLIYSLRNKDVKNAF RKVIGRKLLP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 55,623,704 | 55,623,704 | SNP | A/G | rs12284502 (DbSNP) | |
| 11 | 55,623,847 | 55,623,847 | SNP | C/T | rs7116820 (DbSNP) | |
| 11 | 55,623,845 | 55,623,845 | SNP | C/T | rs35495896 (DbSNP) | |
| 11 | 55,856,371 | 55,856,371 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 55,153,930 | 55,816,828 | CopyNumber | Variation_0308 (DGV) |
| 11 | 55,339,702 | 55,638,112 | CopyNumber | Variation_2926 (DGV) |
| 11 | 54,835,623 | 55,879,426 | CopyNumber | Variation_8690 (DGV) |
| 11 | 55,622,968 | 55,625,997 | Deletion | #217 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.