OR9S24P Olfactory Receptor
| Gene Symbol | OR9S24P1 (View this gene in GeneCards) |
| Family | 9 |
| Subfamily | S |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 31288 |
| Build #39 labels | |
| Chromosomal location | 2:240,079,433-240,080,360 (+) |
| Cluster | 2@241 |
| Synteny | CLIC#7 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5S1P | 41.67% | 204 |
| OR9H1P | 54.29% | 105 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR9S19 | 72% | 109 |
| Mouse | Or9s23 | 64% | 113 |
| Rat | Or9s23 | 64% | 113 |
| Cow | OR9S15 | 71% | 109 |
| Orang | OR9S4P | 56% | 111 |
| Horse | OR9S17 | 66% | 109 |
| Chimp | OR9S24BP | 93% | 105 |
Sequence information
| Nucleotide sequence |
ATGTTCATAGATTAGAAAAAAGTAATATATTAAAATATAATATTTTATTTTATTTGTATT TCTGTTTTTTATTATACTCTAAGTTCTGGAATAGATGTGCAGAACATGCAGGTTTGTTAC ATAGGTATACACGTGCCATGGTGGTTTGCTGCATCCATCAACCCATCATCTACATTAGGT ATTTCTCCTAATTCTATCCCTCCCAGAGTCCCCCACCCCCCAAGAGGCCCACACACACAG TGGGTGATGTTCCCCTCCTTATGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGT GGGAACATGTGGTGTTTGGTTTACTGTTCCTGTGTTAGTTTGCTGAGTGATGGTTTCCAG CTTCATTCATGTCCCTGCAAAGGACACGAACTCATCCTTTTTTATGGCTGCATAGTATAC CATGGTGTATATGTGCCACATTTTCTTTAACCAGTCTATCATTGATGGGCATTTGGGTAG GTTCCAAGTCTTTGCTATTGTGAACAGTGCTGCAATAAACATACGTGTACATGTGTCTTT ATAGTAGAATGATTTATAATATTTTGGGTATATACCCAGTAATGGGATTGCTAGCTCATT ATGGTGGGTGTGACGTTTGTGGTCCTCATCTCCTGTGGCTACACCCCAGCTACTATCCTG AGGATGTACTCCGCAGTTAGGGGATGCAAAATCTTCTCTACCTGTGGTTCTCACATTACT ACAGTGCCTCTCTTTCCCGGGACTGTGTTTGTCATGTATGCCCAGCTGGGGCCTGTGGAG TCCATGGAGCAGGGCAAGGCAATCTCCATCTTCTACACCCTGCTCATCCCAACACTCAAC CCCTCATGTACAGTCTGCGAAAAACGATGTGAAAATAGCCCTGAAGAGGTTGGGCCAGAA ACACACAGCCATGTGAAGGAGAGTAGCG |
| Conceptual translation |
MFIDXKVIYXIIFYFICISVFYYTLSSGIDVQNMQVCYIGIHVPWWFAASINPSSTLG ISPNSIPPRVPH\QEAHTHSGXSPPYVHVFSLFNSHLXGTCGVWFTVPVLVCXMV/br/>CQLHSCPCKGHELILFYGCIVYHGVYVPHFLXVYHXAFGXPSLCYCEQCCNKHTCTC VFIVEXIIFWVYTQXDCXIMVGVTFVVLISCGYTPATILRMYSAVRGCKIFSTCGSH ITTVPLFPGTVFVMYAQLGPVESMEQGKAISIFYTLLIPTL/PLMYSLR/NDVKIALK RLGQKHTAMXRVA Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 2 | 241,019,709 | 241,019,708 | Ins(1) | -/A | rs34164718 (DbSNP) | |
| 2 | 241,019,576 | 241,019,576 | SNP | A/C | rs34497464 (DbSNP) | |
| 2 | 241,019,310 | 241,019,310 | SNP | A/G | rs2083410 (DbSNP) | |
| 2 | 241,019,151 | 241,019,151 | SNP | A/G | rs2083409 (DbSNP) | |
| 2 | 241,019,683 | 241,019,683 | SNP | A/G | rs35542203 (DbSNP) | |
| 2 | 241,019,708 | 241,019,708 | SNP | A/G | rs10207571 (DbSNP) | |
| 2 | 241,018,982 | 241,018,982 | SNP | A/G | rs13020931 (DbSNP) | |
| 2 | 241,019,477 | 241,019,477 | SNP | A/G | rs2099728 (DbSNP) | |
| 2 | 241,019,533 | 241,019,533 | SNP | A/G | rs2099729 (DbSNP) | |
| 2 | 241,019,241 | 241,019,241 | SNP | C/T | rs62184620 (DbSNP), rs13007514 (DbSNP) | |
| 2 | 241,019,634 | 241,019,634 | SNP | C/T | rs35923318 (DbSNP) | |
| 2 | 241,019,038 | 241,019,038 | SNP | C/T | rs7558337 (DbSNP) | |
| 2 | 240,080,060 | 240,080,060 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 2 | 240,080,116 | 240,080,116 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 2 | 240,080,159 | 240,080,159 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 2 | 240,080,217 | 240,080,217 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 2 | 240,080,266 | 240,080,266 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 2 | 240,080,291 | 240,080,291 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 2 | 240,080,046 | 240,080,046 | SNP | C/T | 1000GP (CHBJPT) | |
| 2 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 2 | 240,911,276 | 241,082,695 | CopyNumber | Variation_0031 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.