Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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Chromosome:

OR10AH1P Olfactory Receptor

Gene Symbol OR10AH1P1 (View this gene in GeneCards)
Family 10
Subfamily AH
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR7.1.1P
External Ids HGNC: 19647   GeneBank: NG_004397   
Build #39 labels OR10AH1P
Chromosomal location 7:5,117,089-5,118,087 (+)
Cluster 7@5
Synteny CLIC#13
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR10AC1P 47.62% 315
OR10R2 44.63% 307
OR10Z1 45.19% 312

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR10AH1 82% 316
Mouse Or10ah1-ps 84% 312
Rat Or7r1 48% 310
Cow OR10AH1 82% 318
Orang OR10R2 43% 308
Horse OR10R2 45% 305
Chimp OR10AH1 96% 258

Sequence information

Nucleotide sequence CTCCAGCCTGCACTCCTGTCCCTGCCGCAGACCCCAACGCGAGCTGCTGGCCTGAGTCCA
ATGGGACAGCCCTGCAGGAGTTCGTGATCCTGGGCTTCTCCGTGTGGCCCCCGGGGCTCC
GCGTGCTGCTCTTCGTCCTCTTCTTGCCGCTCTACCTGGTCACCCTGGCGGGGAACCTAC
TGATCCTGGGCCTGGCCCTGGTGGACCCCGCCCTGCACTCGCCAATGTACTTCTTCCTGG
GGGCGCTGTCCGCGGCGCAGGCAGCCTACACGCTGGTGCTCACGCCACGCATGCTGGCCG
GCTTCCTCCTGCCCTCCAGGGGCCAGGCTGTGGACCCCTCTACCTGCGCCGCCCAGATGG
GCCTCTTCGTGGCCCTGGGGGGCTCCGAGTGCCTGCTGCTGGCTGCCATGGCCCTAGACC
GCTACCTGGCTATCTGCCATCCACTCTGCTACCCTCGGCTCATGACCATGGACGTCTGCT
GGGGCCTGCTTGGCCGCCTGCTGCGCGGGTGGCTCTGTCCTGGCCCTGGGCCTCACCGCG
GTCATCTTCCAGCTGCCCTTCTGCCGCGGCGGCCTGGTCAACCACGTCTTCTGCGACCTC
CCGGCCGTGCTGGTGCTGGCCTGCGGGTGCCGGGCCCTGCAGGAGCGCGTCCTCCTGGTG
GCCTGCCTGCTGCTGCTGGTGCTACCCCTGCTCCTCATCCTGCTCTCCTACACCCGGGTG
CTGGTGGTCATCCTGGGTGTTGGGGGGGTCGCGGGCCGCCGCAAGGCCTTCAACACGGTG
GCGTCCCACCTCACCGTGGCTGTGCTCCACTACGGCTGTGCCACGGCCATGTATGCCAGG
CCCCTGAACAGCCGTTCCCTTGAGGAGGACAAGCTGGTCTCGCTCATCTATATCAACGTC
ACCCCGCTGCTGTACCCGGCCATCTACACGCTGCGGAACCGGGACATGCAGGAGGCCCTG
CAATGCATGGTCGGCCAGAGGACGCTGGGGATGGCCACC
Conceptual translation LQPALLSLPQTXNASCWPESNGTALQEFVILGFSVWPPGLRVLLFVLFLPLYLVTLAGN
LLILGLALVDPALHSPMYFFLGALSAAQAAYTLVLTPRMLAGFLLPSRGQAVDPSTCAAQ
MGLFVALGGSECLLLAAMALDRYLAICHPLCYPRLMTMDVCWGLLGRLL\GGSVLALGL
TAVIFQLPFCRGGLVNHVFCDLPAVLVLACGCRALQERVLLVACLLLLVLPLLLILLSYT
RVLVVILGVGGVAGRRKAFNTVASHLTVAVLHYGCATAMYARPLNSRSLEEDKLVSLIYI
NVTPLLYPAIYTLRNRDMQEALQCMVGQRTLGMAT

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
7 5,157,352 5,157,351 Ins(1) -/C rs35638056 (DbSNP)
7 5,157,461 5,157,460 Ins(1) -/G rs71535183 (DbSNP)
7 5,157,018 5,157,018 SNP A/C rs61735717 (DbSNP)
7 5,157,617 5,157,617 SNP A/G rs4077856 (DbSNP)
7 5,157,285 5,157,285 SNP A/G rs10231792 (DbSNP)
7 5,156,854 5,156,854 SNP A/G rs61732321 (DbSNP)
7 5,157,660 5,157,660 SNP A/G rs61997160 (DbSNP)
7 5,156,780 5,156,780 SNP A/G rs56035622 (DbSNP)
7 5,156,929 5,156,929 SNP A/G rs55658538 (DbSNP)
7 5,157,111 5,157,111 SNP C/A rs4078340 (DbSNP)
7 5,156,802 5,156,802 SNP C/T rs73318754 (DbSNP)
7 5,157,486 5,157,486 SNP C/T rs61978637 (DbSNP)
7 5,157,256 5,157,256 SNP C/T rs7803068 (DbSNP)
7 5,157,354 5,157,354 SNP C/T rs61742764 (DbSNP)
7 5,157,501 5,157,501 SNP C/T rs61978641 (DbSNP)
7 5,157,434 5,157,434 SNP C/T rs4077855 (DbSNP)
7 5,156,871 5,156,871 SNP C/T rs4320451 (DbSNP)
7 5,157,367 5,157,367 SNP C/T rs4077854 (DbSNP)
7 5,117,149 5,117,149 SNP A/G 1000GP (CEU)
7 5,117,223 5,117,223 SNP G/A 1000GP (CEU, CHBJPT)
7 5,117,240 5,117,240 SNP C/T 1000GP (CEU, CHBJPT)
7 5,117,252 5,117,252 SNP C/T 1000GP (CEU)
7 5,117,298 5,117,298 SNP G/A 1000GP (CEU)
7 5,117,480 5,117,480 SNP C/A 1000GP (CEU, CHBJPT)
7 5,117,803 5,117,803 SNP C/T 1000GP (CEU, CHBJPT)
7 5,117,870 5,117,870 SNP C/T 1000GP (CEU, CHBJPT)
7 5,118,029 5,118,029 SNP G/A 1000GP (CEU, CHBJPT)
7 5,118,030 5,118,030 SNP G/T 1000GP (CEU)
7 5,117,129 5,117,129 SNP G/A 1000GP (CHBJPT)
7 5,117,723 5,117,723 SNP C/T 1000GP (CHBJPT)
7 100 -100 SNP A/G 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 71 (Hasin)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.