Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR10G5P Olfactory Receptor

Gene Symbol OR10G5P1 (View this gene in GeneCards)
Family 10
Subfamily G
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR11.18.10P, ORL3508
External Ids HGNC: 14811   GeneBank: NG_002261   ORDB: ORL3508   
Build #39 labels OR10G5P
Chromosomal location 11:124,009,669-124,010,478 (+)
Cluster 11@124
Synteny CLIC#29
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR10G4 80.17% 116
OR10G7 80.17% 116
OR10G9 81.03% 116

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR10G9C 78% 116
Mouse Or10g9b 74% 116
Rat Or10g9b 72% 116
Cow OR10G4P 72% 116
Orang OR10BM1P 80% 144
Orang OR10G9I 82% 116
Horse OR10G7 78% 116
Chimp OR10BM1P 89% 135

Sequence information

Nucleotide sequence ATGACAGCATTCATCCTCATGGACCTTCCCCATGTCCCAGCTCTGGACGCCCCACTCTTT
GGAGTCTTCCTGGTGGTTTATGTGCTTACTGTGCTGGGGAACCTCCTCATCCTGCTGGTG
ATCAGGGTGTACTCTCACCTCCACACCCCCAAGTACTACTTCCTCACCAATCTGTCCTTC
ATTGACTTGTGGTTCTTCACTGTCATGGTGCCCAAAATGCCGAGGACCTTGTTGTCCCTG
TGTGGCAAGGCTGTGTCCTTCCACAGTTGTATGACCCAACTCTATTTCTTCTACTTCCTG
GGGAGCACCGAGTGTTTGCTCTACACGGTCATGTCCTATGATCGCTATAGAGGAAATACT
CAGCACTTCCCAGGTAGTGAAAACACTCCCCACGAAGTGAGCCAAATGCTAGTGGCCCGG
GGGGCACACGGGCTCCCACTCATCATCCTGGCAGATCTGAGTGGGTAACTAAGAGTTGAT
AGTTCTTAGTGGGCAATTCAAAATTAGTAATATAATTTAGTTATCCAAGTGAAATTTATT
ACATGTATAGGTCTCAGCATTAAACATTATTCCAAACAACTTGCACAGTTATAATTCTTT
CACAGATTATCTAAGACATTTTTAAATTCACAGCTAGATTTTTATTTATGATGAACATGC
TTGTAGTATCTATTGATGCATTTCTCATCAATAGATTTTTTTAACTTTTAAAAATATATA
TATATATATATTGTAGTTGGGTCTCAGGGATACACAGTGGAATCATTCATATATGTGAGC
TGATGATATGCTTTTGTATTTTTTTGTGTG
Conceptual translation MTAFILMDLPHVPALDAPLFGVFLVVYVLTVLGNLLILLVIRVYSHLHTPKYYFLTNLSF
IDLWFFTVMVPKMPRTLLSLCGKAVSFHSCMTQLYFFYFLGSTECLLYTVMSYDRYRGNT
QHFP\VKTLPTKXKCXPGG/HGLPLIILADLSG/TKSXFLVGNSKLVIXSYPS
EIYYMYRSQHXLFQTTCTVIILSQIIXIFKFTARFLFMMNMLVVSIDAFLINR\FNF
XYIYIYIVVGSQGYTVESFIYVSXYAFVFFCV

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 100 -100 SNP T/G 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI)
11 123,880,482 123,880,482 SNP G/T rs11601573 (DbSNP)
11 123,880,537 123,880,537 SNP C/T rs71491804 (DbSNP)
11 123,880,561 123,880,561 SNP C/T rs61908594 (DbSNP)
11 123,880,581 123,880,581 SNP C/T rs17760637 (DbSNP)
11 123,880,596 123,880,596 SNP C/T rs17128126 (DbSNP)
11 123,880,613 123,880,613 SNP A/C rs11219406 (DbSNP)
11 123,880,685 123,880,685 SNP A/G rs55700020 (DbSNP)
11 123,880,722 123,880,722 SNP A/G rs4936879 (DbSNP)
11 123,881,071 123,881,070 Ins(1) -/T rs11388402 (DbSNP)
11 123,881,072 123,881,071 Ins(1) -/T rs63295861 (DbSNP)
11 123,881,089 123,881,090 Del(2) -/AT rs10533166 (DbSNP)
11 124,009,775 124,009,775 SNP T/G 1000GP (CEU, CHBJPT)
11 124,009,854 124,009,854 SNP C/T 1000GP (CEU)
11 124,009,874 124,009,874 SNP T/C 1000GP (CEU, CHBJPT)
11 124,009,889 124,009,889 SNP C/T 1000GP (CEU, CHBJPT)
11 124,009,906 124,009,906 SNP C/A 1000GP (CHBJPT)
11 124,009,978 124,009,978 SNP G/A 1000GP (CEU, CHBJPT)
11 124,010,015 124,010,015 SNP A/G 1000GP (CEU, CHBJPT)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.