OR10G5P Olfactory Receptor
Gene Symbol | OR10G5P1 (View this gene in GeneCards) |
Family | 10 |
Subfamily | G |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | HsOR11.18.10P, ORL3508 |
External Ids | HGNC: 14811 GeneBank: NG_002261 ORDB: ORL3508 |
Build #39 labels | OR10G5P |
Chromosomal location | 11:124,009,669-124,010,478 (+) |
Cluster | 11@124 |
Synteny | CLIC#29 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR10G4 | 80.17% | 116 |
OR10G7 | 80.17% | 116 |
OR10G9 | 81.03% | 116 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR10G9C | 78% | 116 |
Mouse | Or10g9b | 74% | 116 |
Rat | Or10g9b | 72% | 116 |
Cow | OR10G4P | 72% | 116 |
Orang | OR10BM1P | 80% | 144 |
Orang | OR10G9I | 82% | 116 |
Horse | OR10G7 | 78% | 116 |
Chimp | OR10BM1P | 89% | 135 |
Sequence information
Nucleotide sequence |
ATGACAGCATTCATCCTCATGGACCTTCCCCATGTCCCAGCTCTGGACGCCCCACTCTTT GGAGTCTTCCTGGTGGTTTATGTGCTTACTGTGCTGGGGAACCTCCTCATCCTGCTGGTG ATCAGGGTGTACTCTCACCTCCACACCCCCAAGTACTACTTCCTCACCAATCTGTCCTTC ATTGACTTGTGGTTCTTCACTGTCATGGTGCCCAAAATGCCGAGGACCTTGTTGTCCCTG TGTGGCAAGGCTGTGTCCTTCCACAGTTGTATGACCCAACTCTATTTCTTCTACTTCCTG GGGAGCACCGAGTGTTTGCTCTACACGGTCATGTCCTATGATCGCTATAGAGGAAATACT CAGCACTTCCCAGGTAGTGAAAACACTCCCCACGAAGTGAGCCAAATGCTAGTGGCCCGG GGGGCACACGGGCTCCCACTCATCATCCTGGCAGATCTGAGTGGGTAACTAAGAGTTGAT AGTTCTTAGTGGGCAATTCAAAATTAGTAATATAATTTAGTTATCCAAGTGAAATTTATT ACATGTATAGGTCTCAGCATTAAACATTATTCCAAACAACTTGCACAGTTATAATTCTTT CACAGATTATCTAAGACATTTTTAAATTCACAGCTAGATTTTTATTTATGATGAACATGC TTGTAGTATCTATTGATGCATTTCTCATCAATAGATTTTTTTAACTTTTAAAAATATATA TATATATATATTGTAGTTGGGTCTCAGGGATACACAGTGGAATCATTCATATATGTGAGC TGATGATATGCTTTTGTATTTTTTTGTGTG |
Conceptual translation |
MTAFILMDLPHVPALDAPLFGVFLVVYVLTVLGNLLILLVIRVYSHLHTPKYYFLTNLSF IDLWFFTVMVPKMPRTLLSLCGKAVSFHSCMTQLYFFYFLGSTECLLYTVMSYDRYRGNT QHFP\VKTLPTKXKCXPGG/HGLPLIILADLSG/TKSXFLVGNSKLVIXSYPS EIYYMYRSQHXLFQTTCTVIILSQIIXIFKFTARFLFMMNMLVVSIDAFLINR\FNF XYIYIYIVVGSQGYTVESFIYVSXYAFVFFCV Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 100 | -100 | SNP | T/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
11 | 123,880,482 | 123,880,482 | SNP | G/T | rs11601573 (DbSNP) | |
11 | 123,880,537 | 123,880,537 | SNP | C/T | rs71491804 (DbSNP) | |
11 | 123,880,561 | 123,880,561 | SNP | C/T | rs61908594 (DbSNP) | |
11 | 123,880,581 | 123,880,581 | SNP | C/T | rs17760637 (DbSNP) | |
11 | 123,880,596 | 123,880,596 | SNP | C/T | rs17128126 (DbSNP) | |
11 | 123,880,613 | 123,880,613 | SNP | A/C | rs11219406 (DbSNP) | |
11 | 123,880,685 | 123,880,685 | SNP | A/G | rs55700020 (DbSNP) | |
11 | 123,880,722 | 123,880,722 | SNP | A/G | rs4936879 (DbSNP) | |
11 | 123,881,071 | 123,881,070 | Ins(1) | -/T | rs11388402 (DbSNP) | |
11 | 123,881,072 | 123,881,071 | Ins(1) | -/T | rs63295861 (DbSNP) | |
11 | 123,881,089 | 123,881,090 | Del(2) | -/AT | rs10533166 (DbSNP) | |
11 | 124,009,775 | 124,009,775 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
11 | 124,009,854 | 124,009,854 | SNP | C/T | 1000GP (CEU) | |
11 | 124,009,874 | 124,009,874 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
11 | 124,009,889 | 124,009,889 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
11 | 124,009,906 | 124,009,906 | SNP | C/A | 1000GP (CHBJPT) | |
11 | 124,009,978 | 124,009,978 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
11 | 124,010,015 | 124,010,015 | SNP | A/G | 1000GP (CEU, CHBJPT) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.